Sander lucioperca (pikeperch): 116066256
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Entry
116066256 CDS
T07345
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03410
Base excision repair
sluc04210
Apoptosis
sluc04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116066256 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116066256 (parp1)
04217 Necroptosis
116066256 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116066256 (parp1)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116066256 (parp1)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116066256 (parp1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
116066256 (parp1)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116066256 (parp1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116066256 (parp1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116066256 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
116066256
NCBI-ProteinID:
XP_031178075
Ensembl:
ENSSLUG00000024586
UniProt:
A0A8D0AI16
LinkDB
All DBs
Position
19:complement(16875855..16887818)
Genome browser
AA seq
1016 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADIAGYSDLRWDDQEKVKKAIETGGATGGKGDQKSGAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFKSEYSAVQ
LKGFNALRTEDKEELKKRLPAVKTEGKRKADEVDGPSKKQKKEEEAEKKKLEEHLKNQSQ
LIWGVKDKLKKFCSINDMKELLIANGQDVPSGESNVVDCLADGMAFGALEACKECTGQLV
FKGDAYYCTGDISAWTKCVFKTTTPIRKDWVIPKEFHEVPFLKKFKFKRQDRVYPKEAPT
KTLTAAKAQPMASASSAPTERLPEGAPADKPLTGMKLLTVGKLTKNKDDLKAAVEELGGK
ITSTANKASLCLSTKKEVEKMSKKMEEARDAGVRVVSEDFLTDIKSSGKAFQELVSLHAI
SPWGAEVKVEAPAAAPSAASKSGVLATKSTGRVKEEQGGSKSKKMKLTVKGGAAVDPDSG
LENSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGG
NKLDKFHDKNSALDNFLGVYKEKTGNDWSCSNFTKYPNKFYPLEIDYGQDEEAVKRLTAT
AGTKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQ
AVSESVSEAHILDLSNRFYTLIPHDFGMKKPPLLSSLDYVQAKVQMLDNLLDIEVAYSLL
RGGAQDNESDPIDINYEKLKTKIEVVDKTTDEAKIILDYVKNTHAATHNTYTLEVQEIFK
IAREGERQRYRPFEELHNRQLLWHGSRTTNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFA
DMVSKSANYCHTSQSDPVGLLLLAEVALGNTHELKKASHITKVPKGKHSVKGLGRTAPDP
GATVTLDGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQVNMKYLLNVKFNYQTSLW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcaagaggacaagctgtacaaagcggaatatgccaaaagcggccgtgca
tcgtgcaagaaatgcaaagaaaacatagcgaaagactcgctgagaatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttctcttgcttctggctg
cgagcagcggctcagtccacggctgatattgctggatattctgacctccgctgggatgac
caggagaaggtcaaaaaggccattgaaactggtggagcaacaggaggaaaaggggaccag
aagagtggagctaaaggagagaagacactaaatgactttgcggttgaatatgccaaatcg
aaccgcagcacatgcaaaggctgtgatcagaaaatagaaaaggatcagatccgtgtatcc
aagaaaactgtggacccagagaagccccagctgggtcttatcgaccgctggtaccacact
gcgtgttttgtgagccgtagggaggaactggtcttcaagtctgaatacagcgccgtccag
ctgaagggtttcaacgcacttcggacagaagacaaggaggaacttaagaagaggctccct
gctgtcaaaactgaagggaagcgtaaagctgatgaggtggatggaccatcaaagaaacag
aagaaggaggaagaggcggagaagaagaagctggaggagcacttgaagaaccaaagccag
ctgatttggggcgtcaaagacaagctgaagaagttttgttcaatcaacgatatgaaggag
ctgctgattgcaaatggccaggatgttccctctggagaatccaatgtggtggactgcctg
gccgacggcatggcttttggtgctcttgaggcctgtaaggagtgcacgggccagctggtg
tttaagggcgatgcttattactgtacaggggacatctcagcctggacgaagtgtgtgttc
aaaaccacaacacccatacgcaaagactgggtcatccccaaggaattccacgaagttccc
ttcctgaaaaaattcaagttcaagcgacaggacagggtttacccgaaggaggctcccacc
aaaaccctcaccgcagccaaagcacaacccatggcgagtgcatccagtgcaccgactgag
cgactgccagagggagcacctgcagacaaacctcttactggtatgaaactcttgactgtg
gggaagctgactaagaacaaggatgatctaaaggcggctgtagaggagctgggtggaaag
attaccagcacagccaataaggcctctctctgcctcagcaccaagaaggaggtggagaag
atgagtaagaaaatggaggaggcgagggacgctggcgtgcgcgtggtctccgaggatttc
ctcacagacatcaagtcgtcgggtaaagccttccaggaactggtttccctgcatgccatt
tcaccctggggtgcagaggtcaaagttgaggctccagctgcagctccgtctgcggcctcc
aaatctggagtgctggctaccaaaagcacaggcagggtgaaggaggagcaaggtggtagc
aaatctaagaagatgaaactcacagtcaaaggaggagctgctgtggatccagattcaggt
ctggagaacagcgctcatgtcctggagcagagcgggaagatgtacagtgctacgctgggt
ctcgtggacattgtcagaggaactaactcctactataaactgcagctgctggaggatgat
gtacagaaacggtactgggtgttcaggtcatggggcagagtgggtaccaccatcggaggc
aataagttggacaagtttcatgacaaaaactctgccctggacaacttcctgggtgtctac
aaagagaagacgggcaacgactggagctgctccaacttcaccaaatatcccaataagttc
taccccctggagattgactatggacaggatgaggaagcggtgaagaggctgacggcaacc
gccggcaccaagtccaagctagccaaacccgtccaggagctgatcaagatgatcttcgat
gtagagagcatgaagaaggctatggtggaatttgagattgacctccagaagatgcccctt
ggaaagctgagtaagaggcagatccagagtgcctacgctctcctcactgaagtccagcag
gctgtgtcagaaagtgtgtctgaggcccacatcctggatctctccaatcgcttctacacc
ctgatacctcacgactttggtatgaagaaacccccactgctcagcagcctggactacgtt
caagctaaagttcagatgttggacaacttgttggacattgaagtggcatacagcctgttg
agaggaggggcccaggacaatgagagtgatcccatcgacatcaactatgagaaacttaaa
acaaagattgaggttgttgacaagactacagatgaggctaagatcattttggattatgtt
aagaacacccatgctgctacacacaacacttacacactggaagtgcaagagatcttcaaa
attgctcgagagggagagcgccaacggtaccgtcccttcgaggagctacataatcgccag
ctactgtggcacggttctcgcaccaccaactacgctggtatcatgtctcagggtcttcgc
attgcccctccagaggccccagtgactggttacatgttcggcaaaggtgtgtactttgcc
gacatggtgtctaagagtgcaaactactgtcacacctcccagtcagaccctgtaggcctc
ctgctgctggccgaggttgccctcggcaacacacatgaattgaagaaggcatcccacata
acaaaagtacctaagggcaagcacagtgttaaaggtttgggtcgaactgctcctgatcca
ggcgcaactgtcactctagacggtgtgcaagtgcctctgggaaaaggagtcaacactaac
attgatgacacaagtctcctgtacaatgagtacattgtgtatgatgtggcgcaggtaaac
atgaagtatctcctgaatgtcaagtttaactaccagacgtccctgtggtga
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