Sander lucioperca (pikeperch): 116066448
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Entry
116066448 CDS
T07345
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116066448 (taf1a)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116066448 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
116066448
NCBI-ProteinID:
XP_031178410
Ensembl:
ENSSLUG00000000070
UniProt:
A0A8C9WT65
LinkDB
All DBs
Position
19:11580404..11595094
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AA seq
423 aa
AA seq
DB search
MDDLQRELLEDLDDDSDSSDGNSSKGSKKSKLPLVNPMCAETPKETGFHQSTRVCLEQIR
EALLHHRWQEAAEYMACYPQMLEDPTNGTGQPYKELIWRISTEILHHHPNSKMEDYNNIY
ERMKHSGVRHYLMICLEHSFHLLLIGHIEDAKHQLSVAESWRHGKESAAQYQRIKLIHAY
RSLLDYIIWCDKKFTRSNTEYPDSGDNQDMHNYFRQASVNLKEILKNPGVWDPFILSYVE
MLEFYEDHEEALKVLNDYAYDSTFPPNPNAHVYLYQYLKRHDTSERKLMKVLKILHVLVP
SHELMLEYSSLLLQSEKRSDIQKALGVVMEMLDFACWRSNLDVWERLKSIIQKLQLQEDW
KDVVSGQMAARKDWWPALHFTSFHASKDSEENPELMKVKAPLTKILCPDLMLKYTASQVT
SGE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttgcaaagagagcttcttgaagacttggatgatgacagtgattcctcggac
ggcaactcttcaaaaggatcgaaaaaatcaaagctccctctggttaatcccatgtgtgca
gagactccaaaggaaactgggtttcaccagagtaccagagtctgtctggagcagatcaga
gaagccctgctgcatcacagatggcaagaggcagcagaatatatggcatgttacccacaa
atgttagaagacccaaccaatggcacaggtcagccatataaggagcttatttggagaatc
agcaccgagatccttcaccatcaccccaactcaaagatggaggactacaacaacatctat
gaacgaatgaaacactcaggagttagacattacctgatgatctgtctggaacattcattc
cacctgctgcttattggtcacatcgaggatgcaaagcatcagctgtctgttgctgaaagt
tggaggcatgggaaggagtcagcagctcagtaccagaggattaaactgatccacgcctac
aggagtttactggattatatcatctggtgtgacaaaaagttcacacgctccaatactgag
tatcccgactctggtgacaaccaagacatgcacaactatttcagacaggcctctgtgaat
ctgaaggagattttgaaaaatcctggcgtctgggatcccttcatactgagttacgttgag
atgctggagttctatgaggatcacgaggaggctttgaaagtccttaatgattacgcatat
gacagcacttttccacccaatcccaacgcgcatgtgtacctgtaccagtacttaaagagg
cacgatacttcagagaggaaactgatgaaagtattgaagatcctccatgtactagtccca
agccatgagttgatgttggagtacagctccctcctgcttcagtcagagaaaagaagtgac
atccagaaagctttaggagtcgttatggaaatgttggacttcgcctgctggaggagcaac
ctggatgtatgggagcgtttgaagtccattattcaaaaactacagttacaagaagactgg
aaggatgttgtctctggacaaatggctgcaagaaaagactggtggcctgcgctgcacttc
acaagcttccacgccagtaaagactctgaggagaacccagagctcatgaaagtgaaggca
ccactgacaaaaatcctttgcccggacctaatgctcaagtacacagcctcacaggtaacc
agcggagagtga
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