Sander lucioperca (pikeperch): 116066452
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Entry
116066452 CDS
T07345
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116066452 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116066452 (nelfcd)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
116066452 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
116066452
NCBI-ProteinID:
XP_031178417
Ensembl:
ENSSLUG00000000784
UniProt:
A0A8C9WWG0
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All DBs
Position
6:31902397..31910653
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AA seq
578 aa
AA seq
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MDEEYYSGGGDWEGTGEGPMDYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKTYFQS
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVSMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacagcggcggtggagactgggaaggcacgggggagggtcccatg
gattatgtggaaggggaaaatgatgggaaaatccaggaagattgtcttcagaaattctcc
agcagggattacatcatggagcctgccatcttcaacaccctaaaaacgtatttccaatca
ggtggctccccagaacacgtcatccagcttctctctgaaaactactctgctgtggctcag
acagttaatttactggcagagtggctcatccagatgggtgtagagcctgctcaggtccaa
gagcgagtagaaaatcacctcaagagtctcctgataaaacactttgacccccaaaaagct
gattccattttcactgtcgagggagagactcctgcttggctcgaacagatgatagcacac
actacgtggagagatcttttctataagctggcagaggctcacccagactgtctgatgctc
aacttcactgtgaagctcatttcagatgcaggttatcagggtgagatcaccagtgtgtcc
acagcatgtcagcagctggaagttttctcccgggtgttgaggacatctttggccacgctg
ctggatggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtgtgt
catggcgagcacacctacctctttgcccaggcgatgatgtccatcctgtctcaggaggaa
cagggcggttcagctgttcgtaggatcggccaggaggtgcagaagtcagcgcatgagaga
ggtcacgatgccagtcagataaccctcgcgctcggcacagcagccgcctaccctcgagcc
tgccaggcgctgggtgccatgttgtctaaaggagccctgaatcctgcagatatcacagtt
ctcttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcctgcc
tttctggacctgttcatgcagtcactgtttaagcccggatcaaagattaaccaagaccat
aaacacaaatacatccacatcttggcctacgctgccagtgtggttgaaacgtggaaaaag
aacaagcgagtcaacatcaacaaagatgagctgaagtcgacctccaaggccatagagact
gtgcacaacctgtgctgcaatgagaacaaaggagccacagagctggtggctgaactcggc
actttgtaccagtgcatccggtttccagtagtttctatgggagttttgaaatgggtggac
tggacagtgtctgagccgcggtacttccagctgcagacagaccacaccccggtacattta
gctttactggatgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccagctg
ctcatcaagctttttgagacagagcactctcagctggacgtcatggagcagctggagttg
aagaagactctgctggaccgaatggttcatctgctgagccgtggctacgtcctgcctgta
gttggttacattcgcaagtgtctggagaaactcaacacagacatctccctcattagatat
tttgtgactgaggtgctggatgtgatcgcgcctccctacacatccgactttgttcagctc
ttcctgcccatcctcgagaatgacagcatcgccggaacgatccgcacagagggagaacat
gaccctgttgcagagttcattgctcattgcaagtcaaacttcatcatgataaactga
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