Sander lucioperca (pikeperch): 116066840
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Entry
116066840 CDS
T07345
Symbol
rab5aa
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04137
Mitophagy - animal
sluc04144
Endocytosis
sluc04145
Phagosome
sluc04148
Efferocytosis
sluc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116066840 (rab5aa)
04145 Phagosome
116066840 (rab5aa)
04137 Mitophagy - animal
116066840 (rab5aa)
04148 Efferocytosis
116066840 (rab5aa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116066840 (rab5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116066840 (rab5aa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116066840 (rab5aa)
04031 GTP-binding proteins [BR:
sluc04031
]
116066840 (rab5aa)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
116066840 (rab5aa)
Endosome - Lysosome transport
116066840 (rab5aa)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116066840 (rab5aa)
Exosomal proteins of other body fluids (saliva and urine)
116066840 (rab5aa)
Exosomal proteins of colorectal cancer cells
116066840 (rab5aa)
Exosomal proteins of bladder cancer cells
116066840 (rab5aa)
GTP-binding proteins [BR:
sluc04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
116066840 (rab5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
116066840
NCBI-ProteinID:
XP_031178848
Ensembl:
ENSSLUG00000010063
LinkDB
All DBs
Position
16:19161269..19166800
Genome browser
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQAAGANSGRNRGVDLTEAAQPAKASCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcggggaggagctacgagacccaatggacccaatgcagggaacaagatctgt
cagtttaagctggtgctgttgggggagtcagcggttgggaagtccagcttagtgctccgc
ttcgtcaagggtcagttccatgaattccaggagagcacgataggagctgcatttctcacc
cagacagtgtgtctagatgacacaacagtaaagtttgaaatctgggacaccgcaggtcag
gaacgttaccacagtttggcacccatgtattacagaggagcacaggctgccatcgtggtc
tatgacatcacaaacgaggagtcctttgcgagggcaaagaactgggtgaaggagctgcaa
agacaagctagccctaatatagtcattgctttgtcaggcaacaaggctgacctagccagc
aagagagctgtcgacttccaggacgcccagtcctacgcagatgacaacagcttacttttt
atggagacgtcagccaagacatctatgaatgtgaatgagatatttatggctattgcaaag
agattgccgaagagtgagccccaggctgcaggagccaatagcgggcggaaccggggagtg
gacctgacagaagctgcccagccagccaaggcttcatgctgcagtaactaa
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integrated database retrieval system