Sander lucioperca (pikeperch): 116066845
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Entry
116066845 CDS
T07345
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116066845 (vps50)
Membrane trafficking [BR:
sluc04131
]
Protein recycling
Others
EARP complex
116066845 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116066845
NCBI-ProteinID:
XP_031178858
Ensembl:
ENSSLUG00000017082
LinkDB
All DBs
Position
16:21097180..21207801
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AA seq
993 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETISTAGE
VAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSHFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
SQLHEFKFMGQCRSPSVSPSKQVVSSTSPAQEELSLFQQYLQEGNPFEMQAERKEEETED
VLASNGYESDELEKSVYQDYDSDSDVAEELKQDYVDEQTGDVPLKSASRETIRSKKKSDC
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPFPSPSLPSHGGKDVCPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVGE
NAGVHSAAEDRKEKVPSPHLSQMVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLEEVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctcttatggcccggcagggcctgaaaagtccacaggaaagcatg
gcagacctcagtcctgtagagaacctgagaatcccgagcaaggaggagttgcgggagcta
agggagcagcccatcgacccccaggctgagcaggagatcatcgacagcatcgaggaggtc
tacttctctaacgactccttcgacatggtgcagcacgaactggagaaactaccacctgag
ctgaacctgcaggagctggaggagtatagagacaagctgaaaagacaacaggcagcagtt
tctaaaaaggtcgccgatctcattctggagaaacagcctgcttatgtcaaggaactggag
cgagtgacggcgttacagaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcgtggctaaggagggattcacagaagccagcttgggtctattagccaat
cagaggagacgacaactgctgacaggcctgcttaagtcactcaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgctagaggaggaagactatccaggtgcaatc
cagctttgtctggaatgtcaaaaggctgccagcacctttaaacactacagctgcatcagc
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcccactacaccaaggtccagctggcctac
acgctccttggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatatgtggagctatgtgccggaaacgct
gataccaaattccagaagatgcagtacaaggacctgtgcacgcatatcaccccggacagc
tacattccctgcctgacagatttatgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcacgacaaacaggagaccatttcaactgcaggtgaa
gtagcggcagcagagtctgatgagtcggtggtggaccgcagctatgtaaagaagaagcta
gagcatgggctgacacggatctggcaggacgtccagttgaaagtaaaggcctacatcctg
gggacagacatgtctcacttcaaatatgatgatttcatcgtggtacttgatgtcatcagt
aggttgatgcaggtgggtgaggagttctgcggcagtaagtcagaggtcctgcaggagtct
atcaaacgccagagtgtcaactactttaaaaactatcacagggcacgactggaagagctg
aggatgtttctggaaaatgagacatgggaactttgcccggttaagtctaacttcaacatc
tcccagctccatgagtttaaattcatgggccagtgtcgttctccgtccgtttccccgagc
aaacaggttgtgtcctcgaccagcccggctcaggaggagctgtctctgttccagcagtac
cttcaagaaggaaacccctttgagatgcaggctgagcgcaaagaggaggagacagaggat
gtgctggcatctaatgggtacgagtcagacgagctggagaagagtgtgtatcaagattac
gacagcgacagtgatgtcgctgaggagctcaagcaggactacgttgacgagcagactggt
gatgttccactcaagagtgcgtcccgagagaccataagaagcaagaaaaagtctgactgc
aacctcaataagaccaatgcaccgattctcaccaacaccaccctcaacgtcattcggctt
gttgggaagtatatgcagatgatgaacattctgaagccgattgccttcgatgtcatccac
tgtgtgtcacagctctttgactactacctgtatgctgtatacaccttctttggacgcaat
gacatgcctttccctagcccgtctttgccatctcacggtggtaaagatgtgtgccctgcc
agggtggtgggccctgcttgcttgtatgagtcatcgggcctgggccttatcagcagcaga
ctgagaactacactgaaccggatccaggagagcctcattgacatggaggcagtgggggaa
aatgctggagtccacagcgcagcagaggacaggaaggagaaggtgcccagcccccatctc
agccaaatggtggtcctcactaacagtgggactctttatgggctagcacagagggtggtg
gccactgagtctcttgtgtttctggcggaacagtttgaatccctccagtcccacctggac
acaatgatgcctgcagccaagaagcccttcctgcaacagttttattcccagacggtgtcg
accgccagtgaacttcggaaaccaatatactggattgttgcggccaaggccatcgactac
gagcaaatgttgctcctgatggccggagttaaatgggacattagggagataatgtcacag
cataatgtatatgtggatgtcctgttaaaggagtttgagcaattcaacaagcggctggag
gaagtttccagacatgtgcgcatcccgctgcctgtgtccaacgtcctgtgggagcactgc
atccgcctagccaacaggactctagtagaaggctacgctaatgtgaagaaatgcagcaac
gagggccgggccctgatgcagctggactttcaacagttccttatgaagctggagaagcta
accgacctgcgacccatccctgataaagagtttgttgagacctacatcaaggcctattac
ctgacggagaatgacatggagcagttcatcaagaaccacagggagtactccatgaagcag
ctagccaacttggtgaacgtttgtctgggttcacatataaacaagaaggctcgtcagaaa
ctcctggcggccatagatgacattgacagacccaagagatag
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