Sander lucioperca (pikeperch): 116066864
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Entry
116066864 CDS
T07345
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116066864 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116066864 (zgc:113307)
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116066864 (zgc:113307)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
LRR_6
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116066864
NCBI-ProteinID:
XP_031178893
Ensembl:
ENSSLUG00000005793
LinkDB
All DBs
Position
6:32212135..32219552
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AA seq
389 aa
AA seq
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MWAVFEEEECIRQSGLHISPAVSMTLLCCAVLVSLCVFKLASATVIADMDYGDVPLWINR
LLGEPSVMSLRGRMDPAWFRATNPQACPQQCDCPIQWPTALYCDHRGLADIPDRLPDRTQ
YLFLQGNNISTLSSSFLANITDLRWLILDHNQLQSDKLDQVALQNQAQLCYLFANHNHLR
SVPSALPAGLKQLRLAHNQISSISPGAFQNLHNLTQLLLQGNRLQTITEGDLKGLVSLNL
LDLSGNLFSSVPRHLPPSVQQLYMSKNTLSGLDEDSFVRFLHLKYLRLSHCGLESSGIHL
QVFNFSSLVELDLSYNKLTTIPTVPTTLQYLYLEANEIQEFNVTSFCREVGFLSYSRIKF
LRLDGNKMSYHQLPSDWVFCLRVLESIYI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagtgtttgaagaagaggaatgtatcagacagtcgggattacatatctcaccg
gctgtctccatgactctcctgtgctgtgccgtgttggtgtctctgtgtgtttttaaattg
gcttcagccactgttatagctgacatggactatggagatgttcctctgtggattaatcgc
ctgctgggtgagcccagtgtgatgagcctgcggggacggatggacccagcctggttccga
gccaccaacccccaggcctgccctcaacagtgtgactgccccatccagtggcccacggcg
ctctactgtgaccacagaggcctggcagacatccctgaccgcctgccggacagaactcaa
tacctgtttctacagggtaacaacatctcgaccctgtcctcttcttttctggccaacatt
actgatctacgctggcttatcctggatcacaaccagctgcagagcgacaagctggaccag
gttgcgctgcagaaccaggcccagctctgctacctttttgcaaaccacaaccacctgaga
tcagtgcccagcgctctaccagctggactcaagcagctgcgactggcacacaaccaaatc
agcagcatcagccctggagctttccagaacctgcacaacctgacgcagctgctgctgcag
ggaaacagactacaaaccatcacagagggagacctgaaaggtctggtcagtctgaatctg
ctggacctcagtgggaatttgttctcgtctgtccccagacatttacccccttcagtccag
cagctctacatgtctaaaaacactctttcagggctggatgaagacagttttgtgagattt
ctccaccttaagtaccttcgtctaagtcactgtggtctggagagcagcggcatccacctt
caggttttcaacttctccagcttggtggaactggacctttcttataacaaacttacaacc
attcccacagtccccaccaccctgcagtacctctacctggaggccaatgaaatacaagag
ttcaatgtgaccagtttctgcagagaggtgggatttctgtcctactctaggataaagttc
ctacgattggatggaaacaaaatgtcctaccaccagctgccatctgactgggtcttctgt
ctgcgagtgcttgaaagtatttatatctga
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