Sander lucioperca (pikeperch): 116066959
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Entry
116066959 CDS
T07345
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116066959 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116066959 (pex1)
Membrane trafficking [BR:
sluc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116066959 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_18
ABC_tran
AAA_28
AAA_33
DUF815
NACHT
TIP49
AAA_5
Sigma54_activ_2
AAA_29
ATP-synt_ab
RuvB_N
TsaE
ATPase
NB-ARC
AAA_2
Viral_helicase1
AAA_7
nSTAND_NTPase5
Mg_chelatase
IstB_IS21
APS_kinase
ORC-CDC6-like
Parvo_NS1
CLP1_P
Motif
Other DBs
NCBI-GeneID:
116066959
NCBI-ProteinID:
XP_031179060
Ensembl:
ENSSLUG00000023579
UniProt:
A0A8D0DF25
LinkDB
All DBs
Position
16:19906853..19919392
Genome browser
AA seq
1250 aa
AA seq
DB search
MFSNQGIQPITVVFNNTKNCFLQLSQKLISHLSLNENQALELSWSHGSPVFLSWTLNRTS
SSLDSHKVELCRQLGEKLGLKDGEQGFLRPCHQVSSLHQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFQNAVFPVWVDSHTAIYIQIASLSPSVPYGRLEQFTELVVSPKSRAGIG
NLDGSPVRNSEKQHFHRQQNMDLSSPSGPSLESTTPVPQSHQWGGIADLKSLLRYMIKGT
YDPVKELPPVPDVPVLTDSIYRVCGAPPDSLCTICHVATAVIHIFPWSNGLNAGPTGSQS
PVTYGLLSKVLSPKESRDRAKQAMEKKKNTGVNKIAGGEEMKEEEAVVVRVVCHGTEMLA
HKEKSHSKGEIHSGRVLIPQPLAIRLNIISHSTVRIKPVKSTIKVASSIRLQPLMPLPEE
DDEAIQTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFALTVLKPEPESDPPDQLF
SLTPAIVQKENIQVDREPVTLPDVKSTDETPNPELPSLSILGGIDELSKTGFDFISHSLL
GSPLSRELGATGRGLQGGALLITGSKGSGKSTLSRALCRKAREDLDAHVELVDCKKLQGK
RAETVRQMLQDIFEQAEWRQPSVVLLDDLDHMTGAPTSPEHEHGPEALLQQHIAQSLKDV
VDEVLVHSRLVCLIITSQSEHSLHPSLTEVQGSHFIQGFAHIQPPDQAQRAEILCRLILR
KTTLSEETLQTLDLAAVAKETEGYTPQDLVLLLERAVHANTVQRGHSDQGVCLSWRDFVQ
ALKGFTPPSLWGIDLHTPSGVGLERVGGLREVRQQLMDTILLPAKYPILFSNLPIRHRSG
ILLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRNVFQRAQAAKPCI
LFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDLEARTEILKALSTGAALAADVDLDQLAAATEQFTGADLKALLYNAQL
EAVHNSMASSTPHELISGSDSDMSLSSMIFPNNSSGSDDSVGEGDPGVGLDQSMVLLEPS
ELQAEDEHHRGNVWRLYFGSSYESELGNSPISGLNSQCVSGPDSMTHDLTRATGREPAGS
LPPAYMSSLQSGYQELGPEHLERLQQDINNIKNNYRRVNEDGVRVHSASSQPGLLLCQAH
VNSALAVTRPSLSKADWNRYTKLYEAYGGAGDGKSLHSVTFKPGQRVTLA
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaatcagggcattcaacccataactgttgtttttaacaacacaaaaaactgc
tttcttcagctctcccagaagttgatatcgcatctttccctgaacgagaaccaggctttg
gagttgtcctggtcccatggatctccagtgttcctgagctggactctaaacagaacctcc
tccagcctagacagccataaagtggagctgtgtcgacaactgggagaaaagcttggccta
aaagatggagagcagggcttcctgagaccatgtcaccaggtctcatcactgcatcaagtg
tttgtggagcctctgtcatctgatgactgggaaatcttggagctccacagtgcagcgctg
gagcagcagctgttggatcagatcagagttgttttccaaaatgctgtgtttcctgtgtgg
gtggacagccacacagccatctacattcaaatagcctctctttcgccatctgtgccctat
ggtcgcttggagcagttcacagaactagttgtctctcctaagagccgcgctggaattggc
aacctcgatggttctccagtgagaaacagcgagaagcagcattttcacagacagcaaaat
atggatctttcctccccctcaggaccgtcattagaaagtaccacccctgttcctcaaagc
caccagtggggtggcatagctgacctgaagagcctgctacgctatatgataaagggtact
tatgacccagttaaagagctgccacctgtacccgacgtccctgtcctcactgactctatc
tacagagtgtgcggtgcgcctccagactctctttgcactatatgccatgtcgcaactgct
gttattcatatatttccttggagcaacgggttgaatgctgggccaactggaagtcagtcg
ccagtgacttatggcctgctctccaaagttctctcccctaaagaatcgagggacagagcc
aaacaggccatggagaaaaagaagaacacaggagttaataaaattgctggaggagaggag
atgaaagaagaggaagccgtggtggtcagggttgtgtgccatggtactgagatgctagca
cacaaggaaaaaagtcacagcaagggagagatccatagtggaagagtattgatcccacag
cccctggccataaggttgaatatcatctcacattcaacagttagaattaagccagtcaaa
tcaactatcaaagtagcctcctctattcgcctacaacccctaatgccactgcccgaggag
gacgatgaggcgatccagacagctttccttggttggctacacactcagagtcatgaacct
ttagcctgtctgactgcacggtctggcaccatcctcctacatggaactgatgcaaagtta
gagtttgctttaactgtactgaaaccagaaccagagagcgatcctccagaccagctgttt
tcattaacacctgctattgtccagaaggaaaacatacaggtagacagagagccagtgaca
ttgccagatgtaaaatctacagatgaaacgcccaacccagagcttccatccctcagtatt
cttggtgggatcgatgagctgagtaagactggatttgacttcatctcccacagccttctg
gggagtcccctctcaagagagcttggtgccactggacggggactccaaggaggagctcta
ctcatcactgggtctaagggaagtggaaagagtactctatcccgagccctctgtagaaaa
gctagagaagatctggatgcacatgtggagctggtggactgcaaaaaactacaaggcaaa
agggcagaaacagtaagacagatgctacaggatatttttgaacaggcggagtggaggcag
ccttcagttgtactacttgatgatttggaccatatgactggggcaccaacctcaccagag
catgagcatggacctgaggcgctgctgcaacagcacattgcacaaagtctgaaggacgtg
gtggatgaggtgctggttcactccaggctggtgtgtctgatcatcaccagccagagtgag
cattccctccacccctccctgaccgaggtgcaggggtcccactttatccagggctttgca
cacatccagccacccgaccaggctcaaagagcagaaatcctgtgtcgtctgatactccga
aaaacaaccctatctgaggagaccttacagactctagacctggcagctgttgcaaaggag
acagagggatacacgccccaagaccttgtactacttttggagcgggctgtccatgccaac
actgtacaaagaggacacagtgaccagggtgtgtgtctgtcatggagggactttgtgcag
gctctcaagggattcactcctccctcgctgtggggtatagacctccacactccaagtgga
gttgggctggagagggtgggtgggctgagggaggtgcgacaacagctaatggacaccata
ctcctccctgctaagtatcccatcctgttctccaatcttcctattcgccatcgctcagga
atattgctgtatggagctcctggtacagggaagaccctgctagccagggccgtggccaaa
gacagtggtatgaacttcatcagcatcaagggacctgaacttctgagtaagtacattgga
gctagtgagcagggagtccgtaatgtcttccagagggcacaagctgccaagccatgcatt
ctgttcttcgatgagtttgactcactggcccccaggaggggccacgacagtacaggtgta
accgaccgtgtggtcaaccagctcctcacccagctggatggggtggagggactgcagggt
gtatatgtgcttgcagccaccagtcgtccagatctgattgacccagccctgctgagacct
ggacgactggataagtccctctattgcccccctcctgacctggaggctcgtacggagatc
ctgaaggctctgagcaccggtgctgccctggccgctgacgtggatctcgaccagctggca
gcagcaacggagcagttcaccggggcagacctgaaggccctgctctacaacgcccagcta
gaggccgtccacaacagcatggcctccagcacaccacacgagctgatctctggctcagac
agcgacatgagcctgtcctccatgatcttcccaaacaacagcagtggctcagatgattct
gtgggggagggggacccaggcgtggggctggaccagtccatggttctcctggagcccagt
gagcttcaagcagaagacgaacaccatcgtggaaatgtttggagactctactttggaagc
tcctatgagtcagagttggggaattcaccgatttcaggactgaactcccaatgcgtctct
ggaccggactccatgacccatgacttaacaagggcaacaggtcgggaacctgccggctca
ctcccccctgcctacatgtcctcccttcagagcggttaccaagagctcggcccggagcac
ctggagcgcctacaacaagacattaacaacatcaagaataactacaggagagtcaacgag
gacggtgtccgggtgcattcagcctccagccagccaggcctgctgctatgtcaggctcat
gtgaactccgccctggctgtgaccagaccgtccctcagcaaagctgactggaacagatac
acaaaactgtatgaagcctatggcggtgcaggagacgggaaatctcttcattcagtcaca
tttaaacctggccaacgtgtgactttagcttga
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