Sander lucioperca (pikeperch): 116067081
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Entry
116067081 CDS
T07345
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116067081
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
116067081
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
a_DG1_N2
Motif
Other DBs
NCBI-GeneID:
116067081
NCBI-ProteinID:
XP_031179261
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All DBs
Position
17:28025103..28055012
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AA seq
900 aa
AA seq
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MGDSDDEFDRRRRDKFRRERSDMERSREREERRRDDWPDRDWDRGRERRRDYDRGRRERF
SPPRHISPQHKRMRRDWDEHRGEPYRYDMPYGGGGAPFQGAGPPGWHPDLPRIHPHHGGH
PLQGRLGMMDPDLPPPGPPTMRSFKEFLLNMEDSVDETESVKRYNQYKLDFRRQQLQDFF
LQHKEHEWFRSKYHPDDITARGAESLSALKTRLSVFLFLLDNGWLDDVALDMEHAPAIIK
LLDAAVIKMEGGTDFDLQVLEVPTASAASGSEASSAANANPAAATAASASSSSSSGEKSL
GEASGGKASGPTGSETAGSRTETAAAREKGGTKDSEKDGEEDAKQNGEKEKEEQEEGEEG
EDGEEEDEDEKKDEEEEKEKATKKGRKRKRSVSVDSGEGSASDSDSSHSDGEKEEDEEKE
EDEEKDEDEEDGENKRRKERGKEREKEAPAKPRPLHLTTSLFIRSIPPEVSKEEITTLCR
RYPGFLRVALSDPQPERRFFRRCWVTFDRSVNIKETCWSLQNIRLRDCELSPVVNRDLCR
RVRTVNGLTHHKPVVRNDIRLSARLVHSLDQRGALWAGQMETNPVLKNITDYLIEEVSAE
EEELIGASGGNSDDAKDPAASSEVTVETDETLLKVLDRLLLYLRLVHSVDYYNFCEYPAE
DEMPHRCGLIHVRGPLPVAKITATEVSEHQRMCEERLAPLFSQSETLSEEEAAKLGKKDP
EQEVEKFLASNAQELSKDKWLCPLSGKKFKAPEFVRKHILNKHGDKVSAVRQEVVFFNNF
LLDTKRPALPENKPLPPPPQATPPGMPGFPGQSPQQQSLLGYPPGIRPPMPGFPGGGPSY
PPNQFGAGRGNYDNFRGHLGGGGGGFPGKQRNNNNRGVRGDPRSIIEYRDLDAPDDLDFF
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcgatgatgaatttgacaggaggaggcgggacaagttcagaagagagagg
agcgacatggagcggtcgagagagagagaggagaggaggagggacgactggcccgacagg
gactgggaccgtggcagagagaggaggagggattatgaccgtggtcgtagagagaggttt
tctccgccccgacacatcagccctcagcacaaacgcatgaggagagactgggacgagcac
cggggggagccgtaccgctatgacatgccgtacggaggagggggggcgccgtttcagggg
gcggggcctccgggctggcaccccgacctcccccgcattcacccgcaccacggaggacac
ccgctgcagggccggttggggatgatggatccagaccttcctccccccggtccacccacc
atgcggagcttcaaggagttcctgctgaacatggaggacagcgtggacgagacggagtcg
gtgaagcgctacaaccagtacaagctggacttccggcggcagcagctgcaggacttcttc
ctgcagcacaaagagcacgagtggttccgctccaagtaccaccccgatgacatcacggcc
cggggggcggagtctctgagcgccctcaaaacacggctgtccgtcttcctcttcctgctg
gacaacggctggctggacgacgtggcgctggacatggagcacgcgcccgccatcatcaag
ctgctggacgcagcggtgataaagatggagggtgggacggactttgacctgcaggttctg
gaggtcccgacagcctcggcggcgtccggcagcgaggcgagcagcgccgctaatgctaac
cctgcagccgccaccgctgcctccgcctcctcctcctcctcctcgggagagaagagtctc
ggggaggcgagcggaggaaaggcgagcggtccgacgggctcggagacggcggggagtcgg
acggagacggcggccgccagagagaagggcgggactaaagactcggagaaggacggtgaa
gaggacgccaagcagaacggagagaaggagaaagaagaacaggaagaaggagaagaaggg
gaggatggcgaggaggaggacgaggatgaaaagaaggatgaagaagaagaaaaagagaag
gcgaccaagaagggcaggaagaggaaacgcagcgtgtcggtcgacagcggcgagggcagc
gcctccgactcggactcctcgcactctgacggagagaaggaggaagacgaggagaaggag
gaagacgaggagaaggacgaagacgaggaggacggagagaacaagcgtcgtaaagagcga
gggaaggagagagagaaggaggctccagcgaagccccgccccctccacctcaccacctcc
ttgttcatccgaagcatcccgccagaagtttccaaggaggagatcaccacgttgtgtcgc
aggtacccgggcttcctgcgggtggcgctgtcggaccctcagcccgagaggaggttcttc
aggcggtgctgggtgacgtttgaccgcagtgtgaacattaaggagacctgctggagcctg
cagaacatcaggctccgagactgtgaactgtctccggtggtcaacagagatctgtgtcgg
cgcgttcgcaccgttaacggcctgacgcatcacaaaccggtggtgaggaacgacatccgc
ctgtcggcccgactcgtccacagcctggaccagaggggggcgctgtgggccggacagatg
gagaccaaccccgtcctgaagaacatcacagattatctgatcgaggaggtgagcgctgag
gaggaggagctgatcggagcctcgggggggaacagcgacgacgccaaagaccccgccgcc
tcctctgaggttaccgtggagacggacgagacactactgaaggttctggacagactgctg
ctctacctgcgtctagttcactctgtggattattataacttctgtgagtatcccgctgag
gacgagatgcctcatcgctgcggtctgatccacgtacgaggaccgctgccggtagccaag
atcaccgccaccgaggtgagcgagcatcagaggatgtgtgaggagcgtctggctcctctg
ttctctcagtcggagacgctgagtgaagaagaagccgccaagctgggaaagaaagaccca
gaacaagaggtggagaagttcctagcctccaatgcccaggagctcagtaaagataagtgg
ctctgtcctctgagtgggaagaagttcaaggctcccgagtttgtgcgtaaacacatcctg
aacaaacacggggacaaagtgtccgccgtcagacaggaagtagtcttcttcaacaacttc
ctgctggacaccaagagacccgccctgccggagaacaagcccctcccacccccgccacaa
gccacgccccccggtatgccaggatttcctggtcagtcaccgcagcagcaaagccttctg
ggatatcctcctggaatcagacctcccatgcccggcttccctgggggcggaccttcctac
cctcccaaccagtttggggcggggcgtggtaactatgacaacttcagaggtcatttaggt
ggaggaggaggagggtttcccgggaaacaacgcaacaacaacaacaggggtgtgcgaggt
gaccccagatcgatcattgagtacagagacctggacgctccagacgacctcgacttcttt
tag
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