Sander lucioperca (pikeperch): 116067206
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Entry
116067206 CDS
T07345
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116067206
Membrane trafficking [BR:
sluc04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116067206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
116067206
NCBI-ProteinID:
XP_031179419
Ensembl:
ENSSLUG00000014340
LinkDB
All DBs
Position
3:7283573..7370510
Genome browser
AA seq
2017 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDCSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSTGEEVP
PGFTCVEETPTGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISSNSSQRIYVTYRRAPESQPHSALAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPFPQECLTDQQCSQLGLLSPDPPK
PSSNCKGTAASSATNSTTTTPRLVFTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNL
YQQLVDGQQRPDGLMELSMSESSELSCGKSLQALELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAF
FDDCVDKLYSSERSADKGGKVDSDRPEEARLIEIDESQRSEHTVFITPPELPPLPEGEEY
PLCYRYDGFPVLSLDLFDPVDGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKTAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVVLGVAQFKQVLRRHAPLTQSPLSDGSDLDALSHGSLDSSADTNLAEQGPYAKVDP
TDDRSSTVGREGGSVGARAPVAHSHWGGSELREATLHPGDQSDLGYNSLSKEEVRRGDPS
AQDAAPDKDDKKESDCSSLSETESAKGSKDCLPQLDMEIHSSFKPRGIVRSSCPYDDPSC
KPKSSASAGHVAGLLFTSSLEEIGEVHANSLLRRHKSALEEVVGSASSGSALDWQGVKAR
RLSGDTVGSSGSGTTVLGLGMSQGETDPDKIAGHLGADVKILSCANFSKSRRPRSLALGG
LEGAGAARSRDHREEEDEEETEGQDSSDEDRSNTEAIFDLEDIDLDKPATGAGFSSHKSN
KYNKKPVKRSVSYSGMSTVTSRGAVKRTDIQTGYDPLSLLAAESQSEQQTEDQYPDGDED
STPSARRDLAREIELYMNHMGSPLSSRAPSLDLQDPASPLLLHPSSLSAPRRASLPYSSP
LRTAGVPRSRTFHPPSPSQPVARQRLLSSPSCRSSSTTPSASPRPSPYRDRTDRMSLASP
SPSSSSFALDTLLTPTLDVFKTSVFSAGKGVAEKASRWYSRLATYTTPTKDGHSDRVSVS
SLGVGDPDCSSLLDEEDCGQSEGSVISPQRDGPAGPRRSPRRSRLGSPSAGSSLGRPTSL
LPGCVLSPPGFPLPDKSDLGSSRYTSNTSIFNNYAMELLISSCSRCKTCDCLVYDEEIMA
GWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSVDEAMTSSYSASTGLD
TGTSTLSTPCPATAVFPPSPVTAVQECSGSEWARSTRAQGINIPSEHRKGALDPGAPMAR
SVSAFGPLDEASRLNRCVPTSGSLPSRLNETTEPLSMDWRLHNPEPVTVPYLSPLVLWKE
LESLLENEGDPVITEADMVDHHPIIYWNLVWYFRRLDLPSNLPGLMLTSDHCNRDSQVPR
PWMSEDSKHVLIQILWDNLKLHQDSIQPLYILWNTYNVGYPLSRPVPEEEKPFSEELLQS
VVKSIQRNDVSRPMAQLLQLLAQTLGVKRQRSLYRDVLFLSLVALGKDNIDVDAFDREYK
LAYDRLVPSLVKLTHNCDRPPSAGVMECRRTFGEPYL
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggccggtctgacggac
tgttccaagccgttggaccaggagatccactttgacgacgtctgccacaagacggccaag
ccgaaggcgcccatcacggatgtggcggtggtgatccgctcgacgggcgaggaggtgccg
ccagggttcacctgcgtagaggaaaccccaacaggccattcagctgatcttaacaatggc
ggcctcatggcaccccagatcttcctgtgctacaggagaggtcgagacaagccgccactc
actgacctgggcgtgctgtatgagtggaaggagcggctgaagcagggctgtcacctcatc
cagaccacaccctccggtcgtccagccaacatcagcagcaattcctcccagcgcatctac
gtcacctaccgacgggcgcctgagagccagccgcactccgccctcgccgtcacggacatc
tgcatcatcatcccgagcaagggcgagactcccccgcacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggctcctcggtctacctgtgttataagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattcccactaccagagtctgtccctctcttctgccttcccatgggggccacaatc
gagtgctggccagctaacaccaaatactccctccctgttttttccacctttgtcctcacc
ggagcctccggagagaaggtctatggtgctgccattcagttctatgagcccttcccgcag
gagtgtctgactgatcagcagtgctcccagctaggtctcctgagccccgatccacccaaa
ccctcctccaactgtaaggggacagccgccagcagcgccactaacagcaccaccacaacc
ccacgcttggtcttcaccaacaagtgtatctgtctgctttcccactggcccttctttgac
gctttccgcaagttcctcacattcctctatcgctactctatctccggccctcacgctctg
cccatcgagaaacacatctctcattttatgcacaaagttcccttcccttcctctcagagg
cctcgcatcctggtgcagctttcccctcatgacagcctgatgttgagccagccagtgtct
tctcctttaccgctcagtggcggtcggttttccacgctgctccagaatctcggaccagag
aacgccgtcaccttgctggtgtttgccgtcaccgaacacaagatcctggtccactcgcta
cgacccgccgtactgaccagcgtcactgaagctctggtgtcgatgatcttcccgttccac
tggccgtgcccgtatattcctctgtgccccctggcgttggctgacgtgttgagcgccccc
tgtccattcattgtaggagtggactcccgctactttgatctttatgaccccccaccagac
gtgagctgcgtggacctggacacaaacaccatcttccacaatgaagataagcgagccctc
acatggaagatcttgccaaagaaagcctgtaaaaacctgatgaatgtgctgagcaatctt
taccagcagctggttgacggtcagcagcggcctgatgggctgatggagctgagcatgagt
gaatcgtcagagctgagctgtgggaagagcctccaggccctggagctggagatccaggaa
gccttcctgcgcttcatggcggctattttgaaaggctaccgctcattcttacgacccatc
acccaggccccctctgagaaagccacagacgccagttcgctctttgacttgcaagggttc
ttgaagagccgcgaccgctcacatcagaagttctactcgctgatgaccaaaacccagatg
ttcatccgctttattgaggaatgctccttcgtcagcgacaaagatgccagtctggcgttc
ttcgacgactgtgtggacaaactctacagttcagagcggagtgcagataaaggaggcaag
gtggacagtgacaggccggaggaggccaggctgatagagattgatgaatctcagcgcagt
gagcacacagtcttcatcacacctccagagctgcctcctctgcctgagggggaggaatat
ccactctgctacaggtacgatggtttcccagtgttaagtcttgacctgtttgaccctgtg
gacggcctgcggaccccctcctcccgcctcgctgccaggcacagctgtcccaccagccct
gcccccatgtttagacgcaccaagcaggagatcaaaacagcccagaagatagctaagaag
tactcatccatcccccagctgtggtccaagtgcctgctccgtcactgctacggcctgtgg
ttcatctgtctgccagcatacgtgaaggtgtgtcactccaaggtgcgggcgcttcgcacc
gcctacgacgtcctcaggaagatgcaggcaaagaaactgcagcccccagacgaggtctgc
taccgggtgctgatgcagctgtgtggacagtatggccaacccgtcctggcagtaagggtc
ctctttgagatgaagaaggccggagtccaccccaatgccatcacctatggctactacaac
aaggcggtgttggagagcacgtggccctccagcaccagaggaggttacttcctgtggatg
aagctgagaaatgtcgtcctgggcgtggcgcagttcaaacaggtgctacggcgacacgct
cccctcacacagagccctctgtcagatggcagtgacctggacgctctgagtcacggcagc
ctggatagctctgccgacactaacctggccgagcagggcccctacgccaaagtagacccc
actgacgatagatctagcacagtcggccgcgagggcggcagcgtgggcgccagggccccg
gtggcccactcacactgggggggctctgagctcagagaagccaccctccacccaggggat
cagtcagatttgggttataactcgctgtccaaagaggaggttcggagaggagaccccagt
gctcaggacgccgcccctgacaaagatgacaagaaggagagcgactgcagctccttgtca
gagacagagagtgccaaggggagtaaagactgcctccctcagctggacatggagatccat
tcctccttcaaaccccgcggtattgttcgcagcagctgtccatatgacgatccatcctgt
aaacccaagagctccgccagcgcagggcacgttgcaggtctcctcttcacttcctccctg
gaggagattggtgaggtccatgccaacagtttgctcaggagacataagagtgctctggag
gaggtggtgggcagcgccagcagcggctcggctctggactggcagggcgtgaaggcccgc
cggctgagcggcgacacggtgggcagcagcggcagtggcaccactgtccttggcctgggt
atgagccagggcgaaaccgacccagataagattgcgggacacctaggcgcggatgtcaaa
attctctcttgtgccaacttcagtaagagtaggaggcctcgttcgctggctctgggtggg
ttagagggggcaggtgctgccagaagtcgcgaccacagggaggaggaagatgaagaggag
acggagggacaggactccagtgatgaggacagaagtaatacagaggccatttttgatttg
gaggacatagatttagacaagcctgccacaggggctggcttcagctcccacaaatccaac
aaatataataagaaacctgtcaagcgcagcgtcagctacagtggcatgagcacggtgacg
tccagaggagctgtgaagcgcacagatatacagacgggctacgaccctctatccctgctg
gcagcagagtcacaatccgagcagcagactgaggaccagtacccagacggggacgaggac
agcacgccgagcgcccgtagagacctagctagagagatcgagctctacatgaaccacatg
ggcagcccgctgagcagccgtgcacccagtctggacctgcaggacccggccagccccctc
ctcctccacccctcctcgctctctgccccccgcagagccagcctgccctacagctccccc
ctcaggaccgccggagtaccccgctcccgcaccttccacccgccctctccctctcagccc
gtcgcacgccagcgtctattgtcgtcgccttcctgtcgcagctcaagtaccacccccagc
gccagccctcgacccagcccctacagggataggacagacaggatgagcctggcgtcccct
tcgccgtcctcgtcctctttcgctctggacactctgctcacaccaacgcttgatgtattc
aagaccagcgtgttctctgctgggaagggcgtggcagagaaggcaagccgctggtactcc
cgtctcgccacatacaccacaccgactaaggacggtcacagtgaccgtgtgagtgtgtcc
tccctcggtgttggagatccagactgctcctccctgctggatgaggaggactgtgggcag
tcagagggctccgtgatctctccacagagggatggccctgcggggccccgcaggagcccc
agacgcagcagactgggcagcccctctgcaggctccagccttgggaggcctacatctctg
ctccctggatgtgtcctctcgcctcccggcttccctctgccagacaagtcggacctcggc
tcttcgcgctacaccagcaacaccagcatcttcaacaattacgccatggagctgctgatc
tccagctgctctcgctgtaagacgtgcgactgcctcgtgtacgatgaggagatcatggct
ggctggacagcagacgactccaacctgaacaccacctgcccattctgtggaaaccccttc
ctgcccttcctcaacgtggagatcagggacatgcgaggacccggcaggcttttcctgaaa
ggcagcccgtcggtggacgaggcgatgacctcgtcatactctgcctccacaggtttggac
acggggacgtccaccttgtccaccccctgtcctgcaacagctgtcttccctccctcccct
gtgactgctgtccaggagtgctcagggagtgaatgggctcgatcaaccagagctcaaggt
atcaacatcccctcggagcacaggaagggggcgctggaccccggagcgcccatggcccgc
agcgtcagcgcctttggtcctctggacgaagcatcccgactcaaccgctgtgtgccaaca
tcaggcagcctgcccagccgtctcaatgagaccacggagcccctgagcatggattggcga
ctccacaaccctgagccggtgacggttccctacctgagcccgctggtgctgtggaaggag
ctggagagtctgctggagaacgagggcgacccggtgatcacagaggccgacatggtggac
catcatcccatcatctactggaacctggtctggtacttcagacggctggacctgcccagc
aacctgcccggtctcatgctcacatctgaccactgcaacagagactcccaggtccctcgt
ccctggatgtcagaggacagtaagcacgtgttgatccagatcctgtgggacaacctcaag
ctgcaccaggactcaatccagcctctctacatcctgtggaacacatacaatgtgggttac
cctctgtcccggccggtcccggaggaggagaagccgttcagcgaggagttgctgcagagc
gtggtgaagagcatccagaggaacgacgtcagccggccgatggctcagctgctgcagctg
ctggctcagactctcggagtcaaaaggcagaggagtttgtacagagacgtcctcttcctc
tctctggtggctctgggaaaagataacattgatgttgacgccttcgatcgtgagtacaag
ttggcgtacgaccgcctggtgccgagcctggtgaagctgacccataactgtgaccgtcct
cccagtgccggggtcatggagtgccgcaggacgtttggagagccttacctgtga
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