Sander lucioperca (pikeperch): 116067268
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Entry
116067268 CDS
T07345
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116067268
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116067268
04091 Lectins [BR:
sluc04091
]
116067268
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
116067268
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116067268
Lectins [BR:
sluc04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
116067268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
I-set
EGF_3
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
116067268
NCBI-ProteinID:
XP_031179520
LinkDB
All DBs
Position
3:36604004..36636333
Genome browser
AA seq
1571 aa
AA seq
DB search
MRWIVLLSVCLHVTLAAFDYLYEEHSFMDPEDVLSVSIPLKEPQRPLLGATLLLPCYFED
DTVPDPGAPTIAPLAHRIKWSLVTKEKVTTILVALEGQVRISESYLDRVHLVGYPMTSTD
ASIKISELRSSDSGVYRCEVQHGIEDNHDIVHVQVQGMVFHYRAIMGRYTLTFEKAKTAC
TQNSAVMASPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPRVNCYGDKEELPGVRTYGV
RDLNETYDVYCFTEKMTGRVFYTAAAEKFTFSEAVVACSKQGAQLATTGQLYLAWQGGMD
VCNAGWLGDRSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPLPESRYDAFCYTESPDE
EGSGIVEEGSGVLSVTTVTQSPEVFFRRTTTESEAIGEVETQQPTVVDFTFTESPTGLPL
PQPPNVTEFITDLIEAATARPDTGREPSKGFVMPPTGVVFHYRSGSSRYAFTFVEAQLAC
QSVGASMAKPEQLQAAYEAGYHQCDAGWLLDQTVRYPIVFPRHKCAGDLGDQPGVRSYGL
RPADERYDVYCYIDGLKGEVFHVGSAEGFTYDEAASSCQEQNAILASTGELYTAWKMGFD
KCRAGWLLDRSVRYPINNPRTECGAGKSGVHTVYAHGNQTSYPEVDAKFDAYCFRADILL
IANETGLNITDIQEALLNLTSITDLLRPAVPSIVSPIPVDTSGSGSGSAEFGSGSGVDGA
SGGYSGDLSGSGDRVTSGDLSGSGDLSGSGDRVTSGDLSGSGDLSGSGDRVTSGDLSGSG
DLSGSGDRVTSGDLSGSGDLSGSGDRVISGDLSGSGDLSGSGDRVISGDLSGSGDLSGSG
DRVISGDLSGSGDLSGSGDRVISGDLSGSGDQFTSGDLSGSGDLAGSASAELPSGASGFS
SADASGSALSGEGSGITVVFSGIDSIVSGEGSVSGRLQEAEEGSTGIFIFPSSESGSGVL
SGSGDLSEFGSGSGFSSAESGSSSSASVITDQDFSGFSGFPSGFSSGSASGQSGELSGSG
DIQILLIDRELIDASTPSTNKEYELSGGLLSFSGSGDISGSGILSGSASGSGSGFFSGVT
FVGSGFTDMTVSSSGEQEASGFLLHSSGQESGGHLFSGFGSSGFLSGSGSGMSRSGMSES
GMSGSESSTSGEEGSVTFLTGEFLTEVSGDATLSMELGQGSVEYSGEGSSSSSGFYSGSG
DTRLSTASGTFSGVSSGDLPQVVVLPSPSSEWALTESTTGPEEALSGAELSQIPSGIYGT
PHPVLAPAGLAAPPTATTPASVQAPGDGKETDSVEGGFNPCEPNPCGAASCTVEDGVALC
HEVDVCHPNPCANGATCVESADSFKCLCLPSYGGERCEIDEQQCEDGWTKFQGNCYLHFS
DREVWLDAEQRCRDLNAHLVSIITPEEQDFVNSNAQDYQWIGLNDKTVENDFRWTDGTPL
QFENWRPNQPDNYLNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKKGPASCGAPPEVENA
HMFGNRRDEYPVNAIIRYQCNPGFTQRHPPVVRCKADGQWEKPQVECTDVKARKRIQRRS
SRRLAASSKLH
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggattgtgttgctgtctgtgtgtctacatgtcaccttagcagcatttgattac
ctttatgaagaacactcatttatggacccggaggatgtgctgagtgtgagcattcctctg
aaggagccacagcgtcctctactaggggcaacattgctactaccgtgttacttcgaggac
gacactgtcccagaccccggagctcccaccattgctccactcgctcatcgcatcaaatgg
agcctcgtcaccaaagaaaaagtcacgactatcctggtggccttggaaggacaggtgcgt
atcagcgagagctacctggacagagttcatctggtgggctaccccatgacttctacggat
gctagcatcaagatatctgagttgcggtccagtgactcaggagtctaccgctgtgaggtc
cagcacggcatcgaggacaaccacgacatcgtccatgtgcaggttcaaggtatggtgttc
cactacagggccatcatgggacgctacactttgacttttgaaaaggcaaaaacagcatgc
acccagaacagtgcggtcatggcttcacctgaacagcttcaagcggcctacgatgacgga
ttccaccagtgtgacgctggctggctctctgaccagacagtcaggtacccgatccatgat
cctcgtgtgaactgctatggtgacaaagaggagctgcctggcgtcaggacatatggagtg
agagatctcaatgagacttatgatgtctactgcttcactgagaaaatgacaggcagagtt
ttctacaccgctgctgcagaaaagttcaccttctctgaggctgtggtggcatgctccaaa
cagggagctcagttggctactactggtcaactctacctggcctggcagggtgggatggat
gtctgtaacgccggttggctgggagacaggagtgtccgctaccccatcaacattcgtcgg
ccgcagtgtggagggggtctgctgggggtgcgaactgtttacctccacacaaaccagaca
ggatacccacttcctgagtcccgttacgacgccttctgctacacagagtcccctgatgag
gaaggttcaggcatcgtagaagagggaagtggcgtgttgagtgttaccacggtgacacag
agcccagaggtgttcttcaggaggacaaccacagagagcgaggcgatcggagaggtggag
actcagcagcctaccgtagtggacttcaccttcacagagagccctactgggctgccgctg
cctcagccgcccaacgtcactgagttcatcactgacctgatagaggcggccactgcccgg
cccgacacaggccgagagcccagcaaaggctttgtgatgcctccaacgggtgtggtcttc
cattatcgctcaggctccagccgctatgccttcaccttcgttgaggcccagctggcctgc
cagagtgtcggagcctccatggccaagccagagcagctgcaggcagcatacgaggctgga
tatcaccagtgtgatgcaggatggttactggaccagactgtaaggtatcccattgttttt
cctcgacacaagtgtgctggagatctgggggatcaacctggagttcggtcatatggtttg
aggccagcagacgagagatatgatgtgtactgctacattgatgggctcaaaggtgaggtt
ttccatgtgggctccgctgagggtttcacatatgatgaggctgcttctagctgtcaagag
cagaatgccatactggcctccaccggagagctctacacagcctggaaaatgggtttcgac
aagtgccgtgctggctggctattggatcgtagcgtccgctatcccatcaacaacccccgc
actgagtgtggagctgggaaatcaggagtacacactgtgtacgctcacggcaaccagaca
agctatcctgaagttgatgccaaatttgatgcatactgtttccgagcggatattctactt
attgcaaatgaaactggactgaacatcacagatatccaggaggccctgcttaacctaaca
tcaattactgatctgctgaggcctgctgttccttccatcgtctctcccatccctgtggat
acttcgggctctggctcaggctcagcagaattcggctcagggtctggggttgacggtgcc
tctgggggttactctggagacttgtctggatctggagaccgggtaaccagtggagatctg
tctggatctggagacctgtctggttctggagacagggtaaccagtggagatctgtctgga
tctggagacctgtctggttctggagacagggtaaccagtggagatctgtctggatctggg
gacttgtctggctctggagacagggtaaccagtggagatctgtctggatctggggacttg
tctggctctggagacagggtaatctctggagatctgtctggatctggggacttgtctggc
tctggagacagggtaatctctggagatctgtctggatctggggacttgtctggctctgga
gacagggtaatctctggagatctgtctggatctggggacttgtctggctctggagacagg
gtaatctctggagatctgtctggttctggagatcaattcacctctggagacttgtctggt
tctggagacctggcaggcagtgccagtgctgagttacccagtggagcgtcaggcttcagc
agtgcagacgcttctggatcagctctcagtggagaaggatccggcatcactgttgttttt
tcgggcatcgacagcattgtctctggagagggctcagtttcaggacgactccaagaagcc
gaagagggaagcacagggatctttatcttcccttcatctgaatcaggctctggagtgctc
agtggaagcggggacctctccgaatttggatctggatctggattcagctctgcagagagt
ggatcttccagctctgcaagtgtcatcaccgatcaggacttttctggattcagtggtttc
ccatcaggcttctcctctggaagtgctagtggacagtcaggagagctttctggaagtgga
gacattcagattttactgatagatcgtgaactgattgatgcgtccacccctagtaccaac
aaggagtatgagcttagtggaggcctactgtcgttcagtggttctggagacatttcagga
tctgggattctcagtggctcggcctctggaagtggctctgggttcttctcgggtgtgacc
tttgtgggatcagggttcactgacatgacagtgtcatcctctggagagcaggaggcctct
gggtttttactccacagctctggacaggaaagtggtggacatttgttttctggatttgga
agctcaggtttcctctctggatctggatcaggaatgtctcgatcaggaatgtctgaatca
ggaatgtctggatctgagtcctcaacgagcggagaagaaggcagtgttacatttttaact
ggggagtttttgacagaggtatccggagacgctacactgtctatggagcttggacagggg
tcggtggagtacagcggagaaggaagcagtagcagcagtggcttctactctggcagcgga
gacacacgcttgtccacagccagtggcactttttcaggggtttcctctggtgatctgcca
caggtggtggtgctgccctctccatccagtgagtgggcactgacagagagcaccacagga
ccagaggaggccctcagtggggctgaactgtcacagatccctagtggcatctatggaact
ccccaccctgtgcttgctcccgcaggactggctgctccccccaccgcaactacaccagcc
tctgtgcaggcaccaggcgatggtaaagaaacagattcagtggagggtggttttaaccca
tgtgaacccaacccctgtggagctgcttcatgcaccgtagaggacggggttgctctatgc
catgaggtagatgtgtgccatcccaacccttgtgccaatggagccacctgtgtggagagt
gcagactctttcaaatgcttatgcctgcccagctacggaggggaacgctgtgagatcgat
gagcagcagtgtgaagacggttggactaagtttcaggggaactgctacctgcacttctct
gacagagaggtgtggctggacgcagagcagcgctgccgggacctgaacgcccatctggtc
agcatcatcaccccagaggagcaggactttgtcaactcaaacgcacaggactaccagtgg
atcgggctgaatgacaagacagttgagaatgacttccgctggacagatggcactccactg
caattcgagaactggaggccgaaccagccagataattacttaaactctggagaagactgt
gtggtgatgatctggcatgagaacggccagtggaacgacgtgccctgcaactaccacctg
ccgtttacctgcaagaaaggcccagcgtcctgtggcgccccgccggaggtggagaatgcc
cacatgtttggtaacaggagggatgaataccctgtcaacgccatcatccggtatcagtgc
aacccaggctttacacagcgccaccctcccgtggttcgctgtaaagcagacggacagtgg
gagaaaccccaagtggaatgtactgacgtgaaagccagaaaaaggatacagaggaggagc
agcaggagactggcagccagcagcaagcttcactaa
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integrated database retrieval system
