Sander lucioperca (pikeperch): 116067439
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Entry
116067439 CDS
T07345
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116067439
03015 mRNA surveillance pathway
116067439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116067439
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116067439
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116067439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116067439
NCBI-ProteinID:
XP_031179738
Ensembl:
ENSSLUG00000016739
UniProt:
A0A8C9ZEI9
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All DBs
Position
6:33575213..33583789
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AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKDKPEENGTAANATDSSSAASKSEVEGENKGTEED
DNEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRFPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCGKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcacaggcagtggacgagcaagaagccgcggcggaatcgatc
ggtagcctccaaataaaagacaaaccggaggaaaatggcacggctgcaaatgcaacagac
tccagcagtgcagcgtcaaagtcagaagttgagggagaaaacaagggtacagaagaggat
gacaacgaggacaaagcggcgcagtcgttattgaacaagctgatacggaataatcttgtc
aataacacgaatcaagtggaagttcttcagaaggaccccaactctccgctctactctgtc
aagtcttttgaggagttgcgactcaaaccacagctgcttcagggcgtctacggcatgggt
ttcaaccgaccatccaaaatccaggagactgccttacctatgatgctggccgaacctcca
cagaatctgattgcccagtcgcagtcgggaacagggaaaacagctgcctttgtcctggcc
atgctcagtcatgtagatcccaacaacagatttccccagtgcctgtgtgtgtcacccacc
tacgaactggcacttcagactggcaaggtaatcgagcagatgggcaaacactatcctgag
gtcaaactagtctacgccatcagaggaaacaaattgcagcggggcatgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgtggaaaattcaagttcata
gaccccaagaagatcaaggtgtttgtgctcgacgaggctgacgtcatgattgccacacag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccagatgttg
ctgttctcagccacgtttgaagagacagtgtggaactttgcccagcgtattgtgcctgac
cccaacatcataaagttgaagagagaggaggagacgctggataccatcaaacagtactat
gtgttgtgcaacagcagggaggagaagttccacgccctctgtaacatctacggagccatc
accatcgcccaggccatgatcttctgccatacaaggaaaactgcaggctggctggctggg
gagctgtccagagagggccaccaggtggcgctgcttagtggagagatgcaggtggagcag
agggctgctgtcatcgaccgcttcagagatggcaaggagaaggttctggtcacaacaaac
gtttgcgctcgaggtatcgatgtcgagcaggtttctgtggtgatcaactttgacttgcca
gtagacaaggatggtaacccagacaacgagacatacctgcacaggattggccgcacaggt
cgatttggcaaaaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcagtaagaaaattgaaaaactagacacagatgatctg
gatgaaattgagaaaatcgccagctaa
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