Sander lucioperca (pikeperch): 116067717
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Entry
116067717 CDS
T07345
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116067717 (ctr9)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116067717 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
116067717
NCBI-ProteinID:
XP_031180092
Ensembl:
ENSSLUG00000002142
UniProt:
A0A8C9XAF8
LinkDB
All DBs
Position
3:25146090..25154935
Genome browser
AA seq
1165 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLHECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKSGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMMKDKEEKRNKEVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGRRKKGDVDEFVNDDSDEDLPTRKKKKRRGGSGSEQEEGEDGEKKSRKKRRKPA
RGGGDDSNDEEGGSRPKKRKPRERKKFEKPQPERLPPSLKGKIKSKAIISSSESSSDEDG
LKIAEDRQQRDSGSGSDDEDGHRKRIASDSESDGGRNHSGSEGGRNHSGSEAGSPRHSAG
SGNDSGSDRPVKKRRVQLQSDSEQSDAESKRSRSGSDDESRPGSPVAASDRGSDRGSEAG
SDNEGSPRRSDNGSEHEASNNDDSD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctctatcgagatccctttacgggacacagatgaggttatcgagcttgac
tttgaccagctgccagaaggagacgaggtcatcagtatcctgaagcaggagcatacacag
ctgcacatatggattgctttggctttggagtactacaagcagggcaaaacagaggatttt
gtcaagcttttagaggcagctcgtattgatggaaacctcgactacagagaccacgagaag
gatcagatgacctgtctggacacattggcggcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctctacacgatggca
gacaagatcatcatgtatgatcagaaccatttgttgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgacgctcagttccacttcgtcctcaatcagtccacc
aacaacatccctgctttgctcggtaaggcctgcatctcctttaataaaaaggattacaga
ggagcactggcatactataaaaaggctctgcgtacaaaccccggctgcccagctgaggta
aggctggggatgggccactgttttgtgaagctcagcaaactggagaaggctcgtttggcg
tttggtcgagccctggagcttaattcaaaatgtgtgggcgctcttgttggtttggcggtg
ttagagctcaacagcaaggaggcagattccatcaagaacggagtgcagctcctgtcacgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttc
ttcaaaaaggattacagtaaagtgcagcatctggccctccacgctttccataacacagag
gtcgaggccatgcaggctgagagctgctaccagttagctcgctcgtttcacgtgcaggag
gactatgaccaagcatttcagtattactaccaggccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcctggggcagatgtacgtgtatcgaagagacaaggagaatgcg
gcacagtgcttcgaaaaggttttgaaggcctaccccaacaactacgaaacgatgaaaatt
ctgggatctctctacgcaacatctgacgatcaggaaaagagagacatcgccaaaggtcat
ttgaagaaggtaacggagcagtacccagatgacgtggaggcgtggatcgagcttgctcag
atcctggagcagactgacattcagggagcattgtctgcatacggcacagccacgcgcatc
ctgcaggagaaggtgcaggccgacgttccccctgagatcctcaacaacctgggggctctt
cacttcagactgggcaaccttggagaggccaagaaatactttcttgcctctctcgagcgg
gccaaagctgaaggagagcatgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggcccgcctgtacgaggcaatgtgcgaattccacgaagctgagaaactctac
aaaaacatcctgagagagcatcctaactacgtggactgttatttgcgtcttggagcgatg
gctcgcgacaaaggaaatttctacgaagcttctgattggttcaaagaggccctgcagatt
aatcaggatcacccggatgcctggtcgctgatagggaaccttcacttggccaaacaggaa
tggggaccgggtcaaaagaagtttgagcgtattctgaagcagccatccacacagaatgac
acctactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggaaaaggaaaagagacaccaggatcgagccctggccatatacaaacaagtcctg
cgaaatgacgccaagaacctttacgctgccaatggcatcggtgccgtcctggcccataag
ggcttcttcagagaggcccgcgatgtgtttgcgcaggtgagggaggccacagcagacatc
agcgacgtctggctaaatctggctcacatctacgtggaacagaagcagtacatcagcgcc
gtgcagatgtatgaaaactgcctgaagaaattttacaaatatcagaacacggaggtgctg
ctgtatcttgcgagggcgctcttcaaatgtggtaaactccatgagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcccagcgatacggtgctgatgttcaacgtggccctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggccgtgctt
agcgctgtcaaagagcttgaactggcccacaggtatttcagctacctcagcaagtccgga
gacaagatgaggtttgacctcgctcttgccgcttctgaggccaggcagtgctctgacctg
ctgagtcaggctcagtaccatgtggcgagagccagaaagcaggatgaggaggagaaggag
cttcgggccaaacaagaacaggagagggacctgctgcgtcagcagatgatgaaagacaag
gaggagaagcggaacaaagaggtggaggaacagaagaagctcctggagcagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaaatggccaaa
gaaaagaagaagggcggtgggcgtcgtaagaaaggcgacgtagacgagtttgtcaacgat
gactctgacgaggacctgccaacgaggaagaagaagaagaggaggggcggcagcggcagc
gagcaagaggagggcgaggacggagagaagaagtcgcgcaagaagaggaggaagcctgct
agaggaggaggagatgacagtaacgacgaggaaggagggtcacgacccaagaagcgcaaa
cccagagaacgcaagaagtttgaaaagccccagcctgagcgtttgccaccgtctctcaaa
ggaaagatcaagtctaaggctatcatctcctcttcggagtcgtcttcagatgaggatggc
ctgaaaatagctgaagacagacaacaaagagacagtggttcgggatctgatgacgaggac
ggccacaggaagcgtattgcatctgacagtgagtcagatggagggaggaaccactctggc
agcgagggagggaggaaccactctggcagcgaggcgggcagccctcggcattctgcaggc
tccgggaatgactctggcagcgaccgtccagtgaagaagaggagggtgcagctgcagtcc
gattcagagcagtcggacgccgagagcaagaggagtcgatcagggtccgacgacgagtcc
cggcctggatcacctgtcgctgcgtctgaccgaggatcagacaggggatctgaagcggga
tcagacaacgagggctccccacgccgctctgacaacggctctgaacatgaagcctccaac
aatgatgacagcgattaa
DBGET
integrated database retrieval system
