Sander lucioperca (pikeperch): 118494547
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Entry
118494547 CDS
T07345
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
118494547 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
118494547 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
NACHT
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
AAA_16
DUF4062
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
NPHP3_N
AAA_22
Beta-prop_LRRK2
Beta-prop_WDR75_2nd
Viral_helicase1
NPHP3
SLFN-g3_helicase
NB-ARC
Y_phosphatase
Beta-prop_RIG_1st
WD40_2
Motif
Other DBs
NCBI-GeneID:
118494547
NCBI-ProteinID:
XP_035854748
LinkDB
All DBs
Position
Unknown
AA seq
1636 aa
AA seq
DB search
MAERPASAGDVGLQDVLRGRGSNMIRVFISSTFTDMSSERKALLEKAYPEVLAFCRSLGL
VFEVVDLRWGLRSAPSGDHEAAEIFLQEIERCRRISAGPAFTALLGNRYGERTLPRRVPE
KQFELLLSKLSKNREGTALLTRWFLRDDNAVPPSYVLQPITAHFPASADLGPESEPQRDA
GAGGWRHTETTLLQLLRTAANAGEITAEQKQELLTSVLERELERGLLADGGDPSALLFVR
EIPRQRARDGPKRFARFLDLSAGGVLDADAQRLLAALRSRLLAAPPPSFNLHSVELCKGG
VDPKCREHAQYLDAVCQQFVSQMKAGIAAAMNGRQEKPWGSIADGKKEISDSVGAEACGE
MCFGLCSKEGLLGKPCGKEGLLGNLCGREGLLSKLCCAMWESTNVQHGPLVVHGAAGAGK
TALLCRLAAELRSILGAGATVVIRLLAARHPHRPDVHHVLRGVCLHICLAAGLAPPSGAV
ALPGCFRDVLSEVSRRGNPLLIVLDGVDQLSDRHHAHKLRWLPAVLPPNVHLVVSMDTDS
EAFANMRLKTLESFFEVERLSGDEGKQIMDSYLRASQRTLTAEQSAAALQSFESTGSPLH
LRLILSAAKRWASFTPLTETRLGASMQEMMSQIFLTLEEKHGKELVGGALGYIALAREGL
LEAELRDVMSLDDDVISEVYRNSLPPTPSLIRLPPLLWARLRRDLEDLLEERWTDGVAAI
AFNNRRLAEAVSARYLTSERRGRSLRILAEYFLGQWSGKLKPVALPGLTLLLADRKVPPQ
PLWFAPGLANVRKLQELPYHLLRAGLWDELQQEVIGSAEWLFCKSRVCGVSSVIQDLDQC
TQYMVCIETSLLRDALVLIEPSLDLLDTHLDMSLFYTELLARLCSLATAFPSVIGRLCSH
CEEWLLTCPDPSLVPKCSFLLPPGGALQHTLSGLQGGVLCVDVSVEAELLVAGSDDGVVA
VWSLADQQLLHSLLGHMGAVLSVKVTDNSAHCLSLAADGSLRRWSLTDGQQLLCIQEALP
VDSAPSSVHLHLSDQLIFVYTRTQVKVWKLDGAELFSSSCNDDDDDDDDEDKDGGSVVLG
ILGESVVTLCASGLVRISHPNDEAETVETRQENSQRRLTVVKSVTLPRRGKVFVVSKAGF
LHQISKTGKWTANKFPLVPSLLLVTEDEKILLVGSDETLSLFNIDRNSVDGFLDLQHDDS
VLSACVSSDSRLLASGAADQLIRIWSVTTGALLDTLCGSDTPVTSVLLFNRFVVSASTAA
ANIHLWNLNYDTRHKPTAHVPAGCAHVAVTKDADRVFYVRQQSQTEVISWNNNTGSVSEH
LPVSAEVCCLELAQNKRLLFAGLASGTVLIYPLALPLETLCIPPPESLSRVLCVAVSGHE
KHVAVAYEDSVCLFRITSRDSFPTVDGPLDAFPLSLLHAPLSAMALLSDRRLLYGTSCGE
VKLHDFVSGSSEGLEPHCSRVSCVAVGNHGKHALVGSEDAVQRLWALNPLVLEHTMEYKG
FLFEGVLCAAFSENDQFVFTGSQDRTVKVWDVSTGNLLYVQYVYSPVVRMVTFRNGFVAL
SQQGSVIREVFRCPDHVRPDYNPLRNVRAQYRVTSRDRKNQDGQLSYDYQNFNPAQLDLD
RMGALRDKPSATCRIL
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgtccagcgtcggccggagacgtgggcctgcaggacgtcctgagaggacgg
gggagcaacatgatccgagtcttcatcagctccacattcacagatatgagcagcgagagg
aaagctctgctggagaaagcttacccagaagtccttgctttctgccgtagtctggggctg
gtgtttgaggtggtggatctgcgttggggtctccgaagcgccccgtccggagaccacgag
gccgctgagatcttcttgcaggagatcgagcgctgccggaggatttcagccggtccagct
ttcaccgctctgctggggaaccggtacggcgagcgtactctccctcgccgcgtcccagag
aagcagtttgaacttcttctgtccaaactctccaaaaaccgcgaaggcaccgcgctgctg
actcgctggttcctccgagacgacaacgccgtccccccctcctacgtgcttcagccaatc
acggctcacttccccgcctccgccgacctcgggccggagagcgagccccagcgggacgct
ggcgctggcggctggaggcacacggagacaacgctgctgcagctgctacgcaccgccgcc
aacgccggagagatcacggccgagcagaaacaagagctcctcacatcagtgttggagcga
gagttggagcgcggtctattggcggacggtggcgacccatcagctctgctctttgtgcga
gagatcccccgccagagggcgcgggacggccccaaacgcttcgcccgtttcctggacctg
agcgccggtggcgtgctggacgcagacgctcaacgcctcctcgccgccctccggtcccgc
ctcctcgcagcgccaccgcccagcttcaacctgcacagcgtggagctctgcaagggaggc
gtggaccccaaatgccgagagcacgcccagtacctggacgccgtctgccagcagtttgtc
tcgcagatgaaggctgggatcgccgcggcaatgaacggtaggcaggagaagccctgggga
agcatcgcggacggaaagaaggaaatctcagacagcgtgggggcagaagcttgcggcgag
atgtgctttggtctctgcagcaaagaggggcttctgggtaaaccctgtggcaaagagggg
cttctgggtaatctctgtggcagggaggggcttctgagtaaactgtgctgcgccatgtgg
gagtccaccaacgtgcaacacggcccgctggtggtgcacggcgcggccggcgcggggaag
acggcgctgctgtgcagactggctgcggagctgcgtagcatcctgggtgcgggcgccacg
gtggtgatcaggctgctggctgcacgccatcctcacagacctgacgtccatcacgtcctc
cgcggcgtctgcctccacatctgtctggctgctggtttggctccgccctcgggcgccgtc
gcgctgcccggctgtttccgggacgtcctgtcggaggtttctcggcgggggaaccctctg
ctcatcgtgctggatggcgtggatcaactgtccgaccgccatcacgctcacaaactccgc
tggctgcccgccgtgctgccgcccaacgtccacctggtggtctccatggataccgatagc
gaggcgttcgccaacatgcggctcaagacgttggagagtttcttcgaggtggagcgtttg
tccggagacgaagggaagcagatcatggactcgtacttgcgagcgtcgcagcgaacgctg
accgccgagcagagtgcggccgcgctgcagagcttcgagtctaccggctctcctctgcac
ctccggctgattctgtcggccgccaaacggtgggcgtccttcacgccgctcacagagaca
cgcctgggcgccagcatgcaggaaatgatgtcacagatcttcctgacgctggaggagaaa
cacgggaaggagctggtgggcggcgctttaggatacatcgctttggcgagggaaggtcta
ctggaggccgaactgcgtgacgtcatgtccctggacgatgacgtcatcagtgaggtgtac
aggaactccctccctccgacgccctcgctgatccggctgccccccctcctctgggcgcga
ctcagacgggacctcgaggatctgctggaggagcgctggacggacggcgtcgctgccatc
gctttcaacaaccggcgtctggccgaggcagtttcagctcggtatctgacatcagagcgg
cgagggcggagcctcaggatcctggccgagtacttcctgggtcagtggtcagggaaactg
aagcctgtggctctgccaggcctgacgctgctccttgctgacagaaaggtcccgccccag
ccgctgtggtttgctccaggattggccaacgtcaggaagctccaggagctgccgtatcat
ctgctgcgcgccggtctgtgggacgagctgcaacaagaagtcatcggcagcgctgagtgg
ctgttctgtaagagccgggtgtgcggcgtgtccagtgtgatccaggacctggaccagtgc
acccagtacatggtctgcatcgagaccagtctgctccgagacgccctagtcctcatcgaa
cccagtctggacctgctagacactcacttggacatgtctctgttctacaccgagctgttg
gccagactctgctccttggccacggccttcccttctgtgattggccggctgtgcagccat
tgtgaggagtggttactgacgtgtcccgatccgagccttgttcccaagtgcagcttcctg
ctgccgccagggggggcgctgcaacacacgctgagtgggctgcagggaggtgtgctctgt
gtggacgtcagcgtggaggcggagcttctggttgcaggttcagacgacggcgtggtggcg
gtctggagcctcgctgaccagcagctcctacactcgctgctgggacacatgggtgcggtt
ttgtcggtcaaagtgacggacaactccgcccactgcctctcattggctgctgacggctct
ctgaggaggtggagcctgacggacggccaacagctgctctgcatccaggaggccctgcct
gttgactccgccccttcctccgtacacctccacctgtctgatcagctgatctttgtttac
accaggacacaggtaaaggtgtggaagctggacggggcggagctcttcagcagcagctgt
aatgatgatgatgatgatgatgatgatgaagataaagatggcggttcggtggttctggga
attctgggagaatctgtagttactctgtgtgcttctggtctggtgagaatatctcatcct
aatgatgaggctgaaaccgttgagactcggcaggaaaactcccagagacggttgactgtg
gtgaaatcggtgacgttaccacggcgaggaaaagtgtttgtggtttctaaagcaggattc
ctccatcagatttccaagacgggcaaatggaccgccaacaagtttcctctggttccttct
ttgcttttagtcactgaagatgaaaaaatactgttagtaggaagtgatgagactctgagc
ctctttaacatcgacagaaactctgtggacggattcctcgaccttcaacacgacgacagc
gttttgtccgcctgcgtctcatcagacagtcggctgctcgcctccggagctgctgaccaa
ctcatacgaatctggtcggtgaccactggtgcgttgctggacactctgtgtggttcagac
actcctgtcacgtctgttcttctgttcaaccgcttcgtggtttcagcctcgacggccgcc
gccaacatccacctgtggaatctaaactacgacacacgccacaaacccaccgcccacgtc
ccggcaggctgcgcccacgtggccgtcactaaggacgcagaccgcgtcttctacgtccga
cagcagagccagacggaggtcatcagctggaacaacaacacaggttctgtgtcggagcat
ctgcccgtctctgcggaggtttgctgtctggagttagcgcagaacaaacggctgctgttc
gccggtctggccagcggcaccgtcctcatctacccgttggcgttgcccctggagacgctg
tgcatcccgccgccggagagcctgagccgcgtgctgtgcgtggccgtcagcggccacgag
aagcacgtggccgtggcctacgaggattctgtgtgtctgttcaggatcacgagcagagac
agcttccccacggtcgacgggccgctggacgccttcccgctgtcgctgctgcacgcgccg
ctgtccgccatggcgctgctctcagaccgccggctgctgtacgggaccagctgcggcgag
gtgaagctgcacgacttcgtcagcggcagcagcgaggggctggagcctcactgcagcagg
gtgagctgcgtggcggtcggtaaccacgggaaacatgccctggtgggctccgaggacgcc
gtgcagaggctgtgggccctgaacccgctggtcctcgaacacaccatggagtacaagggt
tttctcttcgagggcgtcctctgtgctgcgttctccgaaaacgaccagtttgtcttcacg
ggatctcaggacagaaccgtcaaagtctgggacgtctccacaggaaacctgctgtacgtt
cagtacgtctactcccccgtggtgcggatggtgaccttcaggaacggcttcgtggcgctg
tcccagcagggctccgtcatcagggaggtgtttcgctgcccggaccacgtccgtccggac
tacaaccctctgaggaacgtccgggcccagtaccgggtcacgtcccgggacaggaagaac
caggacggccagctaagctacgactaccagaactttaacccggcccagttagacttggac
cgcatgggcgcgctcagagacaaaccctccgccacctgtcgcattctgtag
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