Sander lucioperca (pikeperch): 118494673
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Entry
118494673 CDS
T07345
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118494673
03410 Base excision repair
118494673
03420 Nucleotide excision repair
118494673
03430 Mismatch repair
118494673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
118494673
03036 Chromosome and associated proteins [BR:
sluc03036
]
118494673
03400 DNA repair and recombination proteins [BR:
sluc03400
]
118494673
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118494673
DNA Replication Termination Factors
ELG1-RFC complex
118494673
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118494673
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118494673
Check point factors
HRAD17(Rad24)-RFC complex
118494673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
RCF1-5-like_lid
Mg_chelatase
AAA_16
AAA_22
nSTAND3
AAA_24
AAA_11
RuvB_N
Viral_helicase1
AAA_19
AAA_5
AAA_18
ABC_tran
DNAX_ATPase_lid
MipZ
MeaB
DUF815
AAA_28
AAA_assoc_2
AAA_30
AMP-binding_C_3
AAA_25
AAA_23
NTPase_1
T2SSE
bpMoxR
AAA_7
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118494673
NCBI-ProteinID:
XP_035855042
LinkDB
All DBs
Position
3:2759893..2762794
Genome browser
AA seq
351 aa
AA seq
DB search
MVEAECEQQKPVDSAQKAYSGAGDPADRVSYELPWVEKYRPVKLNQIVGNEETVSRLEVF
AREGNVPNIIIAGPPGTGKTTSILCLSRALLGASMKDAVLELNASNERGIEVVRNKIKMF
AQQKVTLPKGRHKIIFLDEADSMTDCAQQALRRVIEIYSKTTRFALVCNTSDKIIEPIQS
RCAVLRYAKLTDGQILTRLQDVVQKEELSVSAGGLEAVIFTAQGDMRQALNNLQSTHSGF
GFINSENVFKVCDEPHPLLVKFMLEHCVAGDIDQAYKVVESLWALGYSPDDIIGNIFRVC
KVLPMAEYLKLEFIKEIGYTHMRISEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggctgagtgcgagcagcagaagccggtagacagcgctcagaaggcgtattca
ggagcaggagaccccgcggatagagtctcctacgagctgccctgggtggagaaatacagg
ccggtcaaactgaaccagatcgtggggaacgaagagacggtgagtcggctggaagtgttc
gccagagagggaaatgtccccaacatcatcatagcaggtcctccaggaacagggaagacc
accagcatcctgtgtttgtcccgggcgttgctgggagcctccatgaaggacgccgtgctg
gagctcaacgcctccaacgaaaggggaatcgaagtggtgaggaacaagatcaagatgttt
gctcagcagaaagtcacgctgcccaaaggacgacacaagatcatcttcctggacgaagcc
gatagcatgacggactgcgcccagcaggcactgcggagggtcatcgagatctactcaaag
acgacgcgcttcgctctggtgtgcaacacgtcagataagattatcgagcccatccagtcg
cgctgcgccgtgctgcgctacgccaagctgacagacgggcagatcctgacacgcctgcag
gacgtcgtccagaaggaggagctgtcggtgtctgccggcggtctggaggccgtcatcttc
accgcacagggagatatgagacaggcgctaaataaccttcagtcgacccactctggcttc
ggcttcatcaacagtgagaacgtgttcaaagtgtgcgatgagccccaccctctgctggtg
aaattcatgctggaacactgcgtggcgggcgacattgaccaggcgtacaaagtggtggag
tcgctgtgggcgctcggatactcgccagatgacatcatcgggaacattttccgggtttgc
aaggtcctccccatggccgagtacctcaagcttgagttcatcaaggagataggttacact
cacatgaggatatctgaaggcgtgaactctctgctgcagatggccgggctgctggggaga
ctctgcagcaagacggcaccccccgctgccagctga
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