Sander lucioperca (pikeperch): 118496048
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Entry
118496048 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
118496048
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118496048
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118496048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_4
zf_RING_Vps8
zf-RING_4
zf-rbx1
zf-RING_10
zf-UDP
Rtf2
IBR_1
zf-RING_16
zf-RING_11
Zn_ribbon_8
DUF3039
Motif
Other DBs
NCBI-GeneID:
118496048
NCBI-ProteinID:
XP_035862042
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All DBs
Position
1:54122003..54129659
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AA seq
208 aa
AA seq
DB search
MSLDGLTIVFCYCGDPPGTYKSGGGARSAEAQLRRSTKAFSHTIVKQICEPCLAIGSSRL
SWVCVSLVCLCSGVEEVVDLTCEGSEAVVDLTNNDSVLLVDEGPQTGAAAESYVVSSDED
EATPPALNAAVMSSARTNGSSRSTPGTISCPVCLDSYSEIVESGRLVVSTRCGHVFCSMC
LRDALKNSPSCPSCRKRLTARQYHPLYV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggacgggcttactattgtcttctgctactgtggtgatccccccggcacctac
aaatccggaggaggagcacggtccgccgaggcccagctacgccgatctacaaaagctttc
tctcatacgatcgtcaaacagatctgcgaaccgtgcctggccatcgggtccagtcggctc
agttgggtgtgtgtctctctcgtgtgtttgtgttcaggtgtggaggaggttgttgatctg
acgtgtgagggatcagaagctgtggtcgacctgacaaacaatgactccgtgctgctagtg
gacgaaggtcctcagacgggcgcggccgccgagagctacgtcgtcagcagcgatgaagat
gaggccacgccccccgcgctcaacgccgccgtgatgtcatcggcacggaccaacggctcc
tccaggtcgactccggggacaatcagctgtcccgtctgtctggactcgtactcagagatc
gtggagagcggccggttggtggtctccacccggtgtggtcacgtgttctgcagcatgtgt
ctgcgagacgctctgaagaattctcccagctgccccagctgcaggaagaggctgaccgcc
cgccagtaccacccgctctacgtctga
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