Saccharomycodes ludwigii: SCDLUD_000230
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Entry
SCDLUD_000230 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_000230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000230
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCDLUD_000230
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCDLUD_000230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
70105552
NCBI-ProteinID:
XP_045936577
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All DBs
Position
I:589998..590645
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AA seq
215 aa
AA seq
DB search
MTVSKYGLQSLLEEFSKLQKKLPKHENENSTDNTITEQQQQSNNRDNTMITGVDLTPYIQ
SLNLDPASKLPFHHVLETLPSPWIETSRSDVEPRHFIPESFTKITNVLGSPVSPPVFNQV
SNVEQNKISLFQDETLFYLFYKHPASAVQELTYIELRKRNWRYHKQLKVWLTKDPFMDPV
VSQDGLSERGRYVFFDPQRWEKVQKDFILYYNAIM
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttcaaaatatgggttgcaatcattgctagaagagtttagcaaattacaaaag
aaattaccaaaacacgaaaatgaaaattcaactgataataccatcacagaacaacaacaa
cagagtaataacagagataatactatgattactggtgttgacttaacgccctatatacaa
tcattaaatctagatccggcgtctaaactaccgttccaccatgttttagaaacactacca
tctccatggattgaaacatcaagaagtgatgtggaaccacgacattttataccggagagc
ttcactaaaataacaaatgtcttaggatcacctgtttcgccaccagttttcaatcaagtt
tctaatgtggaacagaataaaatttctttatttcaagacgaaaccttgttctatttattt
tataaacatcccgctagtgctgtgcaagaactaacatatattgagctaaggaagcgtaat
tggaggtatcataagcaattaaaagtatggttaacaaaggacccttttatggatcctgtt
gtttcccaagatggattaagtgaaaggggtagatatgtgttttttgatcctcaaagatgg
gaaaaagttcaaaaagatttcatattgtattacaatgccattatgtga
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