KEGG   Saccharomycodes ludwigii: SCDLUD_000240
Entry
SCDLUD_000240     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03013  Nucleocytoplasmic transport
slud04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SCDLUD_000240
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SCDLUD_000240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slud03019]
    SCDLUD_000240
   04131 Membrane trafficking [BR:slud04131]
    SCDLUD_000240
Messenger RNA biogenesis [BR:slud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SCDLUD_000240
Membrane trafficking [BR:slud04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    SCDLUD_000240
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    SCDLUD_000240
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    SCDLUD_000240
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_SCAP WD40_RFWD3 WDR54 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_2nd TRM82_WD Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 70105562
NCBI-ProteinID: XP_045936586
LinkDB
Position
I:<611205..>612080
AA seq 291 aa
MVTINNAHSDLIHDAVLDYYGKRLATCSSDKTIKIFEVSQDSQTLVDTLIAHEGPVWQVD
WAHPKFGIILASCSYDGKIIIWKEDPNTSKWTQIDTYNVHSASVNSIQWAPHEYGPLLLA
ASSDGNVSVIEFKDNGTTEPIIINAHAIGVNTASWAPVAASFDNVRRFVSGGADNLVKIW
KYDQDAHTYVLEETLEGHSDWVRDVSWSPSVLTRSYLASVSQDRTCIIWTQENGKKWNKT
LLKNEKFPDVLWRASWSLSGNILAVSGGDNKITLWKENLEGKWEPAGEVEQ
NT seq 876 nt   +upstreamnt  +downstreamnt
atggtaacaattaataatgcacactcagatttaatacacgatgcagtattagattactat
ggaaagcgattagccacatgctcttcggataaaactattaaaatatttgaagtttcacaa
gattctcaaactttggttgatactttgattgctcatgaaggtccggtttggcaagttgat
tgggcccatcccaaatttggtatcatattagcctcttgttcctatgatggtaaaattata
atttggaaagaggatccaaacaccagtaaatggactcaaattgatacctataatgtccat
tccgctagtgttaattcaattcaatgggcaccacacgaatacgggcctttacttttagca
gcctcttctgatggtaacgtctctgttattgagtttaaagataatggtactactgaacca
ataattattaatgcacacgctattggtgtcaatacagcctcttgggctccagtagctgct
tcttttgataatgttagaagatttgtttctggtggcgctgataatctagttaaaatctgg
aaatatgatcaagatgctcacacttatgttttagaagaaactttagagggtcatagtgat
tgggtaagagatgtttcttggtcgccaagcgttttaacacgttcttatttagcatctgta
tctcaagatcgtacatgtatcatttggactcaagagaatggcaaaaaatggaataaaaca
ctgttgaaaaacgaaaagtttccagatgttttatggagagctagctggtccttaagtggt
aatattttagccgtatctggtggtgataataaaattacactatggaaagaaaacttagaa
ggtaaatgggaaccagctggtgaagtcgaacaataa

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