Saccharomycodes ludwigii: SCDLUD_000260
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Entry
SCDLUD_000260 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_000260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slud04147
]
SCDLUD_000260
Membrane trafficking [BR:
slud04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SCDLUD_000260
Exosome [BR:
slud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SCDLUD_000260
Exosomal proteins of bladder cancer cells
SCDLUD_000260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_SPT8
ENTH
NBCH_WD40
Beta-prop_IP5PC_F
CFAP58_CC
Acyl-ACP_TE_C
Motif
Other DBs
NCBI-GeneID:
70105582
NCBI-ProteinID:
XP_045936605
LinkDB
All DBs
Position
I:complement(651874..655524)
Genome browser
AA seq
1216 aa
AA seq
DB search
MKMLTKFESKSTRAKGITFHASRPWALVALFSSTIQLWDYRMGTLLHRYEDHEGPVRGID
FHPTQPLFVSAGDDSTIKVWSLETHKCLFTLTGHLDYVRTVFFHHELPWIISCSDDQTIR
IWNWQNRKEIACLTGHNHFVMCAQFHPTEDLVVSASLDETVRVWDISGLRKKHSAPSTIS
LEEQLNASQNLLDGGFGDCVVKFILEGHTRGVNWATFHPTLPLIVSGGDDRQIKLWRMSA
TKAWEVDTCRGHTNNVNSVIFHPYQDLIISVSEDKTIRTWDLNKRTPVKQFRRDNDRFWL
IAAHPKVNLFGAAHDSGIMVFKLDRERPPFVNNQNQLIFINKEKQVQIFDYKKKITSLPL
VSLKGVDNTWNAFRNICYNPSQHSILINTGENDKFALCVLPRDATGAVEPSNLIFDQGSF
ATFVARNRFVVYDKASQSIEIRDLNNKKTKNIKVDGVVNDIVTAQPGSVLLLKPKSVVHF
DVQQGKIISEVEVNNVKYVSWSQDGQYLALLSKHTITIVDKNMQTITSMHETIRIKSASW
DESHVLIYSTLNHIKYCLLNGDNGIIRTLENTLYTTRVQGKYVYALNRSGEVEILTIDPT
EYRFKKALVNKNFPEVLKIIKTSNLVGENIIAYLQKAGYPEIALQFVQDPQTRFDLALED
GDLNIALEECSKLNSPDEWAVLGENALLQGNAGLSELVYQNNKEFDKLSFLYLATGDKSK
LAKMESIAENRGDASSVILNTIYSNNVTKRSEVFHRFGSLPLAYAVAKSNGIDASSILEE
ASIDESKIVLPDGISSSKFVKSSTLSEPLTVWPLKKTDLSYFEKVVLGQIENLDLQGNEE
QQQQEEESSDVTQEEPLFEDEEPLDIKDTAAGAADDAWDLGDEDLGIDDEDDFADLATNT
NKIPDMDMEESETSMDELAKWVQTSKLPAVLAAAGAFDAAAQALNKQAGVYNFEPLTQRF
IDVYESSKLYMTATPEELPSVTGYIRKDPENTSVILPSIPGISVINSKVSSGFKLFKANK
LEEAIEKFREVIYTVCLLIVDNQEDEEKAFEALKLAREYILGLSIELKRRSLPVTDVKRN
LELAAYFAKVNLLPAHRVNALQVAMTQSFKNKNFVQASYFAEEFLKIAPSGPRAEQARKV
KNRADSIAHDAHEIEFDPYAKFDICAATYTPIYEGSPSVIDPLTGTKYHPSEKGKIDRIS
LISKIGAPASGLRIHV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcttactaaatttgagtctaagtcgacaagggctaaggggattacattccac
gcctctagaccatgggctttagttgctttgttttcttctaccattcaattatgggattat
agaatgggcacattattacacagatatgaagatcatgaaggtccagtaagaggtattgat
ttccatccaacccaaccattgtttgtctccgcgggcgatgattctactattaaagtatgg
tctttggaaactcacaaatgtttattcactctaacaggccatttagattatgtcaggacc
gtatttttccatcacgaattaccatggatcatctcttgttctgatgatcaaactattagg
atctggaattggcaaaatcgtaaagaaattgcctgtttgactggccataaccactttgtt
atgtgtgctcaatttcatccaactgaagatttagttgtttctgcttctttagatgaaact
gtcagagtttgggacattagcggcttgagaaaaaaacattcagctcccagcaccattagt
ttagaggaacaattgaatgcttcccaaaatttactagatggtggattcggcgactgcgtt
gtcaaatttattttggagggccatacaagaggtgttaattgggctacttttcatccaacg
ttaccattaatcgtttccggtggtgacgatcgccagattaagttatggagaatgagtgct
actaaagcttgggaggttgacacttgtagaggccataccaacaatgtcaattccgttata
tttcatccatatcaggatttgattatatctgtaagcgaagataaaacgattaggacttgg
gatctaaacaaacgtaccccagttaaacaattcaggagggataacgatagattttggttg
attgctgcccatcctaaagttaatttgtttggtgctgcccatgattctggtatcatggtt
tttaaattggatagagagagaccaccctttgtcaacaaccaaaaccaactaattttcatt
aataaggaaaaacaagtccaaatcttcgattacaaaaagaaaattacttctctaccacta
gtttccttgaagggagtggacaatacgtggaatgcttttagaaatatttgctataatcca
tctcaacactctattttgattaacaccggtgaaaatgacaaatttgccttatgtgtattg
ccacgcgatgctacaggtgcagttgaaccaagcaacttgattttcgaccaaggttcattt
gctacgtttgttgcccgtaatagatttgttgtatatgacaaggcttctcaatcgattgaa
attcgtgacttgaacaacaaaaaaaccaaaaacatcaaagtggatggcgttgtcaatgac
attgttactgctcagccaggttctgttttattattaaaacctaaaagcgttgttcatttt
gatgtccaacagggtaaaattatttctgaagtggaagttaataacgtcaaatatgtttct
tggtcccaagatggccagtatttagctcttttaagcaaacatacaattacaatcgtcgac
aaaaatatgcagactattacgtcaatgcatgaaaccattaggattaaaagtgcttcttgg
gatgaatctcatgttttaatttactccactttgaatcatattaaatactgtttattaaat
ggagataatggtattatcagaactctggaaaatacactatatactacccgagtacaaggt
aaatatgtttatgctttgaaccgcagtggggaagtggaaattttaaccattgacccaacc
gaatatcgtttcaagaaagcattggtcaacaagaacttcccagaggttttaaaaattatc
aagacatctaacttggttggcgaaaatattattgcttacttacaaaaggctggttaccca
gagattgctttacaatttgttcaagaccctcaaacaagatttgacttggctttagaagac
ggtgatttgaatattgccttggaggaatgttctaaattaaattctccagatgaatgggct
gtattgggcgaaaatgccttgctgcaaggtaatgctggattatctgaattagtttaccaa
aataacaaggaatttgataaattatcttttctatatttggcaacaggtgacaaatctaag
ttagccaaaatggagtccatcgctgaaaatcgtggtgatgcatcgagtgtgattttaaac
actatttacagcaataatgtcacaaagagatcagaagtctttcaccgctttggttctttg
ccattggcctacgctgttgccaagtctaatggtattgatgcctcctctattttagaagag
gcttccatcgatgaatccaagattgttttgccagatggtatttctagttctaaatttgta
aaatcatcaaccttatcggaacctttgaccgtttggccattgaaaaagactgatttatcc
tattttgaaaaagtggttttaggtcaaattgaaaacttagatttacaaggcaatgaggag
cagcagcaacaagaagaagaaagtagtgatgttacccaggaggaacctttgtttgaagat
gaagagcctttagacattaaagataccgctgccggtgcagcagatgatgcttgggacttg
ggtgatgaagatctaggtatcgacgacgaagatgactttgctgatttggcaaccaacacc
aataaaatacctgatatggatatggaggaaagcgagacctctatggatgaattagcaaaa
tgggtacaaacttctaaattgccggctgttcttgccgctgctggcgcgtttgacgcagct
gctcaagctttaaataaacaagctggtgtatacaattttgaacctttgacacagcgtttt
atcgatgtttatgaatcatctaaactttacatgaccgccacgccggaagaattgccctct
gtaacaggttacattcgtaaggatccagaaaacacatcagttattttgccttcgatccca
ggcatttcagttattaattctaaagtttcttctgggttcaaattgtttaaagctaacaaa
ttggaggaagctatagagaaattccgtgaagtgatatacacagtttgcttattgattgta
gataaccaggaggacgaagaaaaagcgtttgaggctttaaaactagcaagagaatatatt
ttaggtctatctattgaattgaaacgtcgttctctaccagttactgacgttaagcgtaat
ttggaattagctgcctattttgccaaagttaacttattacctgctcatagagttaatgct
ttgcaagttgcaatgacccaatcgtttaaaaacaagaattttgttcaagcttcgtatttt
gctgaagaattcttgaaaattgctccatccggccctcgtgctgagcaagctcgtaaagta
aagaatagagccgatagtattgcacatgatgcacatgaaatagagtttgacccatatgct
aaatttgatatttgtgcagctacgtatactccaatttatgaaggttctccgagcgtgatt
gacccattaactggaactaaatatcatccatccgaaaagggtaagattgatagaatttca
ttaatttcaaaaatcggtgcaccagcctctggtttaagaattcatgtttag
DBGET
integrated database retrieval system
