Saccharomycodes ludwigii: SCDLUD_000316
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Entry
SCDLUD_000316 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
slud
Saccharomycodes ludwigii
Pathway
slud04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SCDLUD_000316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000316
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_000316
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_000316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slud04147
]
SCDLUD_000316
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SCDLUD_000316
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SCDLUD_000316
Membrane trafficking [BR:
slud04131
]
SNARE
SNARE associated proteins
Others
SCDLUD_000316
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SCDLUD_000316
Exosome [BR:
slud04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCDLUD_000316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_33
CDC48_2
TIP49
AAA_22
RNA_helicase
AAA_14
Mg_chelatase
nSTAND3
AAA_28
Vps4_C
NPHP3_N
AAA_17
Parvo_NS1
IstB_IS21
AAA_7
ATPase
AAA_24
AAA_18
AAA_25
ABC_tran
DUF815
ResIII
PhoH
SLFN-g3_helicase
TsaE
Zeta_toxin
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
70105638
NCBI-ProteinID:
XP_045936658
LinkDB
All DBs
Position
I:780395..782929
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AA seq
844 aa
AA seq
DB search
MANEKKPLLDASGADPKDDDSTATAILRRKKKPNQLLVDDAVNDDNSVIAINSNTMDSLE
LFRGDTVLVKGKRRKDTVLIVLIDDELEDGVCRINRVVRNNLRVRLGDLVSIHSCPDIKY
ATRISVLPIADTIEGITGNLFDVFLKPYFVEAYRPVRKGDHFIVRGGMRAVEFKVVDVEP
EDYAVVAQDTVIHYEGEPINREDEENNINEVGYDDIGGCRKQMAQIRELVELPLRHPQLF
KAVGIKPPKGILMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF
EEAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNIVVIAATNRP
NSIDPALRRFGRFDREVDIGVPDATGRLEILRIHTKNMKLADDVDLEVLASETHGYVGAD
VASLCSEAAMQQIREKMDLIDLDEDEIDAEVLASLGVTMENFRYALGNSNPSALRETVVE
SVNVTWNDIGGLDDIKQELKETVEYPVLHPDQYLKFGLSPSKGVLFYGPPGTGKTLLAKA
VATEVSANFISVKGPELLSMYFGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGNSL
GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE
PARLSILKAQLRKTPLEPGLDLTAIVKATQGFSGADLSYIVQRAAKFAIKDSIEANKRYE
AQQAIKAENANADDVKMEDGEEEEKPDLVPYITKHHFAEAMKTAKRSVSDSELRRYEAYS
QQMKASRGQFSNFSFGGSATGNNAEGGISGPALGSGSDSTGDNNNGPSAATFGADGGDED
DLYS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgaaaagaaacctttattagatgcatctggtgctgatccaaaagatgatgat
agcaccgctaccgctattttaagaagaaagaagaaaccaaatcaattattggttgacgat
gctgttaacgatgacaattctgttattgctatcaactcaaacaccatggactctttggaa
ttattccgtggcgatactgtcttagtcaaggggaaaagaagaaaagatactgtcttaatt
gttttgattgatgacgaattggaagatggggtttgtagaattaaccgtgttgttcgtaat
aacttacgtgttagattgggtgacttggtctcaatccattcttgtcccgatattaaatat
gccaccagaatctccgttttaccaattgctgatacaattgaaggtatcaccggtaatttg
tttgacgttttcttgaaaccatattttgtcgaagcttatagaccagtgaggaagggcgac
cacttcattgtcagaggtggtatgagagctgttgaatttaaagttgttgatgttgaacca
gaagactacgcggtggttgcacaggacaccgttattcattacgaaggtgaacctattaac
agagaagacgaagaaaacaatattaacgaagtgggctatgatgatattggtggttgtcgt
aagcagatggcacagattagggagttggttgaactacctttgagacatcctcagctattt
aaagccgttggtattaaaccaccaaagggtattttaatgtatggcccaccgggtaccggt
aaaacattaatggccagagctgttgctaacgagactggtgcctttttttttttaattaat
ggtccagaagttatgtctaagatggcaggcgaatcagaatcgaacttaagaaaggcattt
gaagaggctgaaaagaacgctccatctattatttttattgatgaaatcgattccattgct
cctaagcgtgacaagaccaatggtgaagttgagagaagagttgtttcccaattattgacc
ctaatggatggtatgaaggctagatctaatattgttgtcattgccgctactaacagacca
aactctattgacccagctttaagaagattcggtagatttgatcgtgaagttgatattggt
gttccagatgccactggtagactagaaattttgcgtattcataccaaaaacatgaagttg
gccgatgatgttgatttggaagtgttggcctctgaaactcatgggtatgtcggtgcagat
gttgcatctttgtgttctgaagctgctatgcaacaaattcgtgaaaaaatggatttaatt
gatttggatgaagatgaaatagacgcagaagttttagcttctttgggtgttaccatggaa
aatttccgttatgcattaggcaattctaacccatctgctttacgtgaaactgttgtggaa
agtgtcaatgttacttggaatgatattggtggtttggatgacattaaacaagaattgaag
gaaaccgttgaatatcctgttttgcatccggatcaatatttgaaatttggtttatctcca
tctaagggtgttttgttttacggtccaccgggtactggtaagactctattagctaaagct
gttgctactgaagtttctgctaattttatatctgttaagggaccagaattgttaagtatg
tattttggcgaatctgaatctaatattcgtgatatttttgataaagctagagctgctgct
ccaaccgtcgtctttttggatgaattagactctatcgccaaggctagaggtaactcatta
ggtgatgccggcggggcttctgacagagttgtcaaccaattgttgactgaaatggatggt
atgaatgctaagaaaaacgttttcgttattggtgccactaatagaccagatcaaattgat
ccagctattttaagacccggtagattagatcaattgatttatgttccattaccagacgag
cctgctaggttatctatcttaaaggctcaattaagaaagactccgttagaacctggtttg
gatttaactgctattgtcaaggctacccaaggcttttctggtgctgatttatcgtacatt
gttcaaagagctgctaagtttgccatcaaagattctattgaagccaataaacgctatgag
gctcaacaagccatcaaagccgaaaatgccaatgccgatgacgttaagatggaagacggt
gaagaagaagaaaaaccagacttggttccatatattaccaagcatcattttgctgaagct
atgaagactgccaagcgttctgtatctgattctgaattaagacgttatgaagcttattct
caacaaatgaaggcttctaggggccaatttagtaatttctcatttggtggttctgccact
ggcaacaatgcagaaggtggtatctctggtcctgctttaggtagcggttcggactctacc
ggtgacaataataatggtccttctgctgctacttttggtgcagatggaggtgatgaagat
gatttgtatagttag
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