Saccharomycodes ludwigii: SCDLUD_000418
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Entry
SCDLUD_000418 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03030
DNA replication
slud03410
Base excision repair
slud03420
Nucleotide excision repair
slud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCDLUD_000418
03410 Base excision repair
SCDLUD_000418
03420 Nucleotide excision repair
SCDLUD_000418
03430 Mismatch repair
SCDLUD_000418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slud03032
]
SCDLUD_000418
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_000418
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_000418
DNA replication proteins [BR:
slud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SCDLUD_000418
DNA Replication Termination Factors
ELG1-RFC complex
SCDLUD_000418
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SCDLUD_000418
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SCDLUD_000418
Check point factors
HRAD17(Rad24)-RFC complex
SCDLUD_000418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_11
Mg_chelatase
AAA_assoc_2
AAA_24
AAA_16
SLFN-g3_helicase
ResIII
AAA_19
ATPase_2
AAA_30
AAA_7
AAA_5
DUF815
AAA_28
UBA_Ucp12
AAA_2
RNA_helicase
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
70105740
NCBI-ProteinID:
XP_045936754
LinkDB
All DBs
Position
I:complement(<981919..>982986)
Genome browser
AA seq
355 aa
AA seq
DB search
MTDFPNKKTKLSPSTTLGIQDNSNKPWVEKYRPSNLDEVTAQEHAIAVLKTSLKSANLPH
MLFYGPPGTGKTSTILALTKELFGPKLIKSRVLELNASDERGISIVREKVKNFASLTVSK
PTNDDLAKYACPPYKIIILDEADSMTSDAQSALRRTMETYSSVTRFCLICNYVTRIIDPL
ASRCTKFRFKPLNETNALDRLTYISTKELLHFENDDMNGICFQILKICDGDLRKAITLLQ
SSSKMTSNGTGEITSAQINELAGVIPDNYLEKLIESISSKNVQYIITFVNDFIRQGWSVS
AVVSQLYDYYTKAEESDNLQSKVDWLLFDTDSKLTNGTNEHIQLLNLSLQLSQLY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttccccaataaaaaaaccaaattatcaccttccaccacactaggaatacaa
gacaacagcaacaagccatgggttgaaaaatataggccctccaacttggatgaagttaca
gcccaggaacatgcaattgccgttttaaaaacatctttaaaatcagccaatttgccgcac
atgttattttatggtccaccaggtacaggtaaaacttcaaccattttagctttgaccaaa
gaattatttggccctaaactgattaaatcacgtgttttagaactaaatgcgtccgatgaa
cgaggaatttccatcgttcgtgaaaaagttaaaaattttgccagtttaaccgtttctaag
ccaacaaatgatgatttagctaaatatgcttgtcctccatacaaaattattatcctagat
gaagccgattcaatgacgtcagatgcgcagagcgcactacgtagaacaatggaaacttat
tcttcagtcaccaggttttgtctaatttgtaactatgttaccagaatcattgatccgcta
gcttcaagatgtaccaagtttaggtttaaaccattaaatgaaacgaatgcgttggataga
ttgacatatatttctactaaggaattgttacattttgaaaatgatgatatgaatggtata
tgctttcaaattttaaaaatatgtgatggagatttaagaaaggcaattacactattacaa
tcgtcctccaaaatgactagtaatggaactggagaaataacttcggcgcaaattaacgaa
ttagctggtgtaattccagacaattatttagaaaaattaatagaatctatatccagtaag
aacgttcagtatataattaccttcgttaatgattttattaggcaaggatggagtgtatcg
gcagttgtgtcacaattatatgattattatactaaagctgaagagagtgacaacttgcaa
agtaaagttgattggttactatttgatactgactctaaattgacgaatggtaccaatgag
catattcagctattaaatttatctttacaattgtctcaattatactaa
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