Saccharomycodes ludwigii: SCDLUD_000794
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Entry
SCDLUD_000794 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SCDLUD_000794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_000794
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_000794
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
SCDLUD_000794
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
SCDLUD_000794
RSF complex
SCDLUD_000794
WICH complex
SCDLUD_000794
B-WICH complex
SCDLUD_000794
NORC complex
SCDLUD_000794
BRF complex
SCDLUD_000794
NuRF complex (fruit fly)
SCDLUD_000794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
HAND
ResIII
DEAD
Myb_DNA-binding
HDA2-3
Motif
Other DBs
NCBI-GeneID:
70106116
NCBI-ProteinID:
XP_045937106
LinkDB
All DBs
Position
I:1880333..1883845
Genome browser
AA seq
1170 aa
AA seq
DB search
MNTQENKETLAERKKRYILEHDAKFEKLKDKNDTVGRFKYLLDLTDLFRHFITVRAKNDK
NIQLLLKSLDSTSKKTSDNNFRMKKKGIDHTKGRHRKTEKEEDQEILMMEEDSELEDNDD
VIPHEYEFFNESPTYIKDGKLRDYQVQGLNWLISLHKNKLSGILADEMGLGKTLQTISFL
GYLRYVNKIDGPFLIIAPKSTLDNWKREFAKWTPDINVVVLQGDKDERHALISNVIMQAN
FDVVIASFEIVLREKNALKKICWQYLVVDEAHRIKNEQSALSQIIRLFYSKSRLLITGTP
LQNNLHELWALLNFLLPDVFGDSALFDEWFNNSESEQDQDLIVQQLHTILSPFLLRRIKA
DVEKSLLPKIETNVYVGMTDMQLKWYKMLLEKDIDAVNGAVGKREGKTKLLNIVMQLRKC
CNHPYLFEGAEPGPPYTNDEHLVFNSGKMIILDKLLEKKMEQGSRVLIFSQMSRLLDILE
DYCYLRGYEYCRIDGSTAHEDRIKAIDDYNAPNSKKFIFLLTTRAGGLGINLVTADTVIL
YDSDWNPQADLQAMDRAHRIGQKKQVHVFRFVTEHAIEEKVIERAAQKLRLDQLVIQQGS
ANNGVGAASSKNSLANSKDDLLDMIQYGARDVFDNKAVKISSDADIDKILKKGEQKTKEL
NAKYQALGLDDLQKFNGLSEHSAYEWNGTNFQKKKVASPLETWINPSKRERKRRNDIQSY
SVDDYYREVMHKASNSYNKSKDDNDAEHGGSNNNNNGDHSFSQGRAPRAPKGTLMTDYQF
FPQEIKELDEKELLYFKRKSKYKVTKYDIMDDVNITNDDEDDEEDDEEDEDEDDVDDDEA
DGGEVDDDETAVDETNDGTDIAAELGDDSKGGNRSITATETPCSALNGSNEGGNKNEEQG
KNVEGDAGEKEKNNKIGSRTEEVELSLDDKIKLEQEKIDNASEFTEDDNKKRQELIQQGF
SNWSKREFTTLVNAMAKFGKDQYKPIASMLTNKTEDDVRNYCKVFWERYKEINGYEKYIS
LINKNEKKLKLLRHQELLLKQKMENCKSPIHDFNIQYPPNNARRTYNTLEDRFILMHVVK
YGLFSENVFEIIRQDILSSSLFQFDWFIKTRTAHELSKRVYTLLTIITREIEGPESNNAT
KRKKAKTKENISSLNNSNKQQYSNKKVKTE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccaagaaaataaagaaactttggcagaaagaaagaaaagatacattttagaa
catgatgccaagtttgaaaaactaaaagataaaaacgatacagttggaaggtttaaatat
ttattggatttaactgatttatttcgccattttatcacagttcgagctaagaatgataaa
aacatacagctactactaaaatcattagactcaactagtaaaaagacatctgataataac
tttcgtatgaaaaaaaagggtatagatcatactaagggtagacatcggaaaacagaaaag
gaagaagatcaagaaattttaatgatggaagaagattcagaattagaagacaatgatgat
gtgattccacatgaatacgaatttttcaatgagtctcctacatatatcaaagatggaaaa
ttaagagactatcaagtacagggcttaaattggttgatttcgttacataagaataaacta
agtggcattttggctgatgaaatggggttgggtaaaactctacaaaccatttcctttcta
ggttatctaagatatgtaaataagatagatggtccatttttaataattgcccccaaatca
actttagataattggaaaagagagtttgctaaatggactcccgacatcaatgttgtagtt
ttacaaggggataaagatgaaagacatgcgctaatatcaaatgtaataatgcaagctaac
tttgatgttgtgattgcatctttcgaaatcgttttaagagaaaaaaatgctttaaagaaa
atttgctggcaatatttggtcgtcgatgaagcacaccgtattaaaaatgaacaaagtgcg
ttatcacaaattattagattgttttattcaaaaagtagattattaattactggcacacca
ctacaaaataatttacatgagctatgggctttgttgaattttttgctaccagatgttttt
ggtgatagtgcattatttgatgaatggtttaataattcggagagtgaacaagaccaagac
cttattgtacagcaactacataccatcctaagtccctttttattgagaaggattaaagct
gacgtagaaaaatctttattgcctaagattgaaaccaatgtttatgttggcatgacagac
atgcaacttaaatggtacaaaatgttactagaaaaagatatcgatgcagttaatggcgct
gtggggaaaagagaggggaagacaaaattgctaaatattgtgatgcaattgagaaaatgt
tgtaatcatccatatctcttcgaaggagcagaacctggtcctccatatactaatgacgag
catttagtttttaattcagggaaaatgattattttggataaattattggaaaaaaaaatg
gaacaaggctcaagagtcttgattttcagtcaaatgagtagattgttggatattttggag
gattattgctacttaagaggatatgaatattgcagaattgatggctctactgcgcatgaa
gatagaattaaggccattgatgactataatgcccctaattcaaaaaagtttatatttcta
ttgactacacgtgcgggcggtttaggtattaatttagtgactgcagatactgttatatta
tacgattctgattggaacccacaagcagatttgcaggccatggatagagcgcacagaatt
ggtcaaaagaaacaagtgcatgtttttagatttgttactgagcatgccattgaagaaaaa
gttattgagcgggcggcccaaaaattaagattggaccaattggttatccaacaaggtagt
gctaataatggtgttggtgcagcttccagtaaaaactcattggccaattctaaagatgac
ttgttagacatgatccagtatggtgctagggatgtatttgataataaagccgttaagatt
agttctgatgccgatattgataaaattttgaaaaaaggtgagcaaaaaactaaagaatta
aatgccaaatatcaggctttaggattagatgatttacaaaaattcaatggattatcagaa
cactctgcttatgaatggaatggcacaaacttccaaaaaaaaaaagtggcttcgccatta
gaaacatggattaatccaagtaaaagagaacgtaaaagaagaaacgacatccaaagttat
tctgttgatgattactacagagaggttatgcacaaagccagtaatagctataataaatca
aaagacgacaatgatgctgagcatggtggcagcaacaataataataatggtgatcatagc
ttttcacaaggcagagctccaagggcgccaaagggtactttaatgacagactatcaattt
ttcccacaagaaatcaaagaattggacgaaaaggaattgttatattttaaaaggaaaagc
aaatataaagtcactaagtatgatataatggatgatgtcaatattactaatgatgatgaa
gatgatgaagaagatgatgaagaagatgaagatgaagatgatgttgatgatgatgaagct
gacggtggtgaagttgatgatgatgaaactgctgtagacgagacaaatgatggcactgac
attgctgctgaattgggtgatgattctaaggggggaaataggagcattacagctactgaa
acaccttgctccgccttgaatggtagtaacgaggggggaaataagaatgaggaacaagga
aaaaatgttgaaggagacgctggcgaaaaagaaaagaataataaaataggtagtcgaact
gaagaagtagagttatctttagatgacaaaattaagcttgagcaagagaaaatagacaat
gcttctgaatttacagaagatgataacaaaaaaaggcaagaactaatccaacagggtttt
agtaattggtccaaaagagaatttacaaccttggtcaatgctatggcgaaatttggcaaa
gaccaatacaaacctattgcttcaatgctaaccaataaaacagaggatgatgtaaggaat
tattgtaaagttttctgggaaagatataaggagattaatggatacgaaaaatatatatca
ttaataaacaaaaatgaaaaaaaattaaaactattaagacaccaagaattattacttaaa
caaaaaatggaaaattgtaaatcaccaatacatgattttaatattcaatatccacccaat
aatgcaagaagaacttacaataccctggaagataggtttattttgatgcatgttgttaaa
tatggattattttccgaaaatgtttttgaaatcatacgtcaagatattttatctagcagc
ctatttcaattcgattggtttataaaaacaagaactgcccatgaactttctaaaagagtt
tatacgctattgaccataataacaagagaaattgagggtcctgaaagtaataatgctact
aaaaggaaaaaagcaaaaactaaggaaaacatttcctctttgaacaattctaacaaacaa
cagtatagtaacaaaaaggttaaaactgagtaa
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integrated database retrieval system
