Saccharomycodes ludwigii: SCDLUD_000839
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Entry
SCDLUD_000839 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCDLUD_000839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_000839
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
SCDLUD_000839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
EMC3_TMCO1
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
70106161
NCBI-ProteinID:
XP_045937148
LinkDB
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Position
I:complement(1978005..1980875)
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AA seq
956 aa
AA seq
DB search
MAKSRFPDRPPNGTGFGITPKKQPNPFNITQSYEKLTRPFKIPLNHGTRNRVNKAGTIST
VTRSTRKAALVAQDRVSKALDLNHVLQENEEKEEEYTSTTVIKQRYDALSSTRYLEDSKN
IEIKLHSKFNVPIKNYVRSHNLNLRLGMKPKLIDLPPRPLHDPYDDLAIVLYDPTTDGDM
PDEGDDIQEEPSCSTTTTEEQTNKGATPSTTTDKKLVNIHPPKMNNGVKNKSLKELLGSD
TNDEGKQKEKKKYGNVAVVIDPKLGKILRPHQIEGVRFLYRCVTGLVMKDFIKEKSNLLL
LPSTPSTPLPSPDEYGIEGEEAEKESQHIKKKKKKKTKKEIEEEELNIKFKNQSSHAKNA
YGCIMADGMGLGKTLQCLALLWTLLRQGPNGKPTINKAIIVCPSSLVGNWANEIVKWLGA
NVLTPLAIDGKKHSTNGLSVSDAIRQWANACGRQIVKPVLIISYETLRRNVDSLSNCLVG
LMLADEGHRLKNEDSLTFTALNSINCNRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRN
QFRRNFEIPIIRGRDADADKEECLLGQKKLQDLSDIVSKFIIRRTNDILAKYLPCKYEHV
VFCKLSPFQEKLYKYYIKSRDLLKFSGDLDNLEETTSTNNKADTPLKCIGVLKKLCNHPD
LIDFEKDMPEIDLNDNLLIPEEYDPSYLHSVGTGRRGGGSGGNRGIQTLGISSKFSILER
FLFKIRTESNDKIVIISNYTQTLDLIDKMCRSNSYGSLRLDGTMSVNKRQKLVDKFNDPS
SNEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIC
TGTIEEKIYQRQSMKMNLSSCVVDEKEDVERLFSSDNLRKLFIYDGNCDCDTHNTFNCKR
CKNGKQIIRSSAMLYGDATTWNHLNHVGLQKTNDHLLKNEFQFKDISYVFQYISHT
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagcagatttcctgatagaccacccaatggtacaggctttggtattactccc
aaaaaacaaccaaacccatttaatataacccagtcatatgagaaactaacaagaccattc
aaaataccattaaaccatggcacaagaaacagagtcaataaagctggtaccataagtact
gttacgagaagcactaggaaagctgctttagtagcgcaggatagagtctcaaaagcatta
gatttaaaccatgtattacaagaaaacgaagagaaagaagaagaatatacgtctacaact
gttattaagcaaagatatgacgctctaagttctactagatatttagaggattcaaaaaat
attgaaattaaattgcattccaaatttaatgtacctattaagaattacgtaaggtcccat
aatctaaatttaagactaggtatgaaacctaagttgatagacctacctccacgtccatta
catgatccgtacgacgatttggctattgtattatatgatcctactacagatggtgatatg
cctgatgaaggtgatgatatccaggaagaaccgagttgctctactaccactaccgaagaa
caaactaataaaggtgccactccaagtacaacgactgacaaaaaactagtcaatatacat
cctcctaaaatgaataatggtgttaaaaataagtcattaaaagaattattaggaagtgat
actaatgatgagggaaaacaaaaagagaaaaaaaaatatggtaacgttgccgttgtcatt
gatcctaaactgggcaagattttaagaccacaccaaatcgaaggtgtcaggtttttatac
agatgtgttaccggtttagtaatgaaagattttattaaggaaaagagtaacctgctatta
ttaccctctactccttcaacaccgttaccatcaccggatgaatatggtattgagggcgag
gaagcagaaaaagaatcacaacatattaagaagaaaaaaaagaaaaagactaaaaaagaa
attgaagaagaagaattaaatattaaatttaaaaaccaatcttctcatgctaaaaacgca
tatggatgtattatggcagatggaatgggattgggtaaaactttacaatgcttggcttta
ttgtggactcttttgaggcaaggtcctaatggtaaacctacaatcaacaaggctataatt
gtatgtccctcgagtttagttggtaattgggccaatgaaattgtcaaatggctaggtgca
aatgtattaactcccttggcaattgatggtaaaaaacattccaccaatggtttatcagta
tctgatgcgattaggcaatgggctaatgcatgtgggaggcagattgttaagcctgtgcta
atcatatcgtatgaaactttaagaagaaatgtagactctctaagcaattgtctagttggg
ttaatgttggctgacgagggccataggttaaaaaatgaggacagtctaacttttactgcc
ctaaacagtattaattgcaatagaagagtcattttatcaggtacaccaatccaaaacgat
ttgagtgagtattttgcactattaaatttttcaaaccctggtctattgggtacaagaaat
caatttcgtagaaattttgaaatacccattataagggggagagatgcagatgcggacaag
gaagaatgtttattaggacaaaagaaactacaagatttaagtgatattgtttccaaattt
attattagaaggacaaatgatattttagccaagtatttgccatgcaaatacgaacacgtt
gttttttgcaaattaagtccgttccaagaaaaattgtacaaatattatataaaatctaga
gatttattaaaattctccggtgatcttgacaatctagaagaaacaactagtacaaacaat
aaagcagatacaccattgaagtgcatcggtgttttgaaaaaactatgcaatcatcctgat
ttaattgattttgaaaaagatatgccagagattgatttgaatgataacttattaattcca
gaggaatatgatccatcatacttacattccgttgggactgggcgtcgtggtggtggcagc
ggcggtaatagaggcattcaaacacttggtatatcttcgaaatttagtattttggaaaga
tttttatttaaaattagaacagagtcaaacgataaaatagttatcatatcaaattatact
caaactttggatttgattgataaaatgtgccgcagtaacagttatggttcattaagattg
gatggtactatgtcggttaataaaagacaaaaattggttgataaattcaatgatccaagt
agcaacgagtttatctttttattaagttctaaagcaggcggttgcggtattaacttaatt
ggtgctaatagattaattttgatggatccagattggaatccagctgcagatcaacaggct
ctagctcgtgtttggagagatggccagaaaaaggattgctttatttataggtttatttgt
actggaacaatagaagaaaagatatatcaacgtcaatcaatgaaaatgaatctttcatct
tgtgttgtggatgaaaaggaggatgtggagagattatttagttcagataacctaagaaag
ttatttatatatgatggtaattgcgattgtgatacccacaatactttcaattgcaagcgt
tgtaaaaatgggaaacaaattatcagatccagtgctatgctatatggagatgctactaca
tggaatcatctgaatcacgttggcttacagaaaaccaatgatcacctactaaaaaacgag
tttcagttcaaggatataagttatgtttttcaatatatctcgcatacttga
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