Saccharomycodes ludwigii: SCDLUD_000903
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Entry
SCDLUD_000903 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_000903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000903
Enzymes [BR:
slud01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
SCDLUD_000903
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
SCDLUD_000903
3'-5' decay
Other 3'-5' decay factors
SCDLUD_000903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF6061
Motif
Other DBs
NCBI-GeneID:
70106225
NCBI-ProteinID:
XP_045937206
LinkDB
All DBs
Position
I:complement(2114092..2115102)
Genome browser
AA seq
336 aa
AA seq
DB search
MNNTTSNTITEYSIIKNLVRDFKLDKVLESNPQTKTVSLLGKIKNEQAIIILEKLHFDEN
DYKHLTDLQLVKDIACNDIYHWGLIRFEEYGAVDEESRLNVKLNLIWPATEVHIKKYIEQ
KFHIIRETPEMYVTIVLPYIEEMHNNGRLNWVYNILYKDAELDRIIYKDPKEFVLLPDMK
WSGEPEEIDALYLVAIVYRDDIRSIRDLRYKDRDWLIEIQDKIKQIVTCAYKIESDVLRI
FVHYQPSYYHFHIHVVNVKQFGLKDGISVGKAILLDDIIENLKYMGEDGYKNRVITYIIG
ESHGLWERGLKDYRESKQNCSNDDIKEAKEEQIIIK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaataatactacttctaatacaatcacagagtacagtattataaaaaatttggttaga
gattttaaacttgataaagtattagaatcgaatcctcaaaccaaaacagtttccttatta
ggtaaaattaaaaatgaacaagccatcatcatattagaaaaattacattttgatgaaaat
gattataaacacttgactgatttacaattggtgaaggatattgcctgcaatgacatctat
cattgggggttgatcagatttgaagaatatggtgcggtcgatgaggagtccagattaaat
gttaaattgaatttaatttggccagccactgaagttcatattaaaaaatacattgaacaa
aaatttcatattatcagggaaaccccagaaatgtatgtaaccatagttttgccatatatt
gaggagatgcataataatggcagattgaattgggtgtataacattttgtacaaagatgca
gaattagacagaattatatataaagaccccaaggaatttgttttattacctgatatgaag
tggtctggtgaacctgaagaaatagatgccctatatttggtggctattgtctatagggac
gatattaggtcaattagagatttaagatataaagatagggattggttgattgaaattcaa
gataaaattaagcaaattgttacctgtgcttataaaattgagtcggatgtgttgaggatt
tttgttcattaccaaccgtcatactatcatttccacattcatgttgttaatgtcaagcaa
tttgggttgaaggatggtatatctgttggtaaagcgattttgttagacgatatcattgag
aatttgaagtatatgggtgaagatggctataagaatagagttatcacgtacatcattggg
gaaagccatggcttatgggaaagaggcttgaaagattatcgagaatcaaaacaaaattgc
tctaatgacgatatcaaggaagctaaagaggaacaaatcataataaaataa
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