KEGG   Saccharomycodes ludwigii: SCDLUD_000939
Entry
SCDLUD_000939     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K07897  Ras-related protein Rab-7A
Organism
slud  Saccharomycodes ludwigii
Pathway
slud04138  Autophagy - yeast
slud04144  Endocytosis
slud04145  Phagosome
slud04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slud00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    SCDLUD_000939
   04145 Phagosome
    SCDLUD_000939
   04138 Autophagy - yeast
    SCDLUD_000939
   04148 Efferocytosis
    SCDLUD_000939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slud04131]
    SCDLUD_000939
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slud04147]
    SCDLUD_000939
   04031 GTP-binding proteins [BR:slud04031]
    SCDLUD_000939
Membrane trafficking [BR:slud04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    SCDLUD_000939
Exosome [BR:slud04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCDLUD_000939
  Exosomal proteins of other body fluids (saliva and urine)
   SCDLUD_000939
  Exosomal proteins of colorectal cancer cells
   SCDLUD_000939
  Exosomal proteins of bladder cancer cells
   SCDLUD_000939
GTP-binding proteins [BR:slud04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    SCDLUD_000939
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 ATP_bind_1 RsgA_GTPase Gtr1_RagA AAA_22 PduV-EutP AAA_7 nSTAND3 NACHT SRPRB ABC_tran AAA_16 cobW AAA_24 AAA_5 Septin PRK
Other DBs
NCBI-GeneID: 70106261
NCBI-ProteinID: XP_045937242
LinkDB
Position
I:complement(2198736..2199467)
AA seq 243 aa
MSGGRKKNILKVIILGDSGVGKTSLMQRYVNGKYSQQYKATIGADFLTKEVTLDDSSSHV
NNSNSNNNSNNNFNNDNSRTQHNNNTSNGSKTATLQVWDTAGQERFQSLGVAFYRGADCC
VLVYDVTNLKSFENIKVWRDEFLLHANVSSPETFPFVILGNKIDVDEAKKVVSARQAQDL
AKGLGDIPLFFTSAKSSINVDIAFEEIARSALQQNQLEDDMFEDDFNDAINIQLDNGPSS
CQC
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtctggtggaagaaagaaaaatattttaaaagtcattatattaggtgactcaggtgtt
ggtaaaacatctcttatgcaaaggtatgttaatggtaaatattcacagcaatataaagct
accataggtgctgattttttaacaaaagaagttacattagacgatagcagcagtcatgtc
aacaacagcaatagcaataataacagcaataataattttaataatgataatagccgtact
caacataataacaatactagcaacggcagtaaaactgctacattacaagtatgggatact
gcaggacaggaaagatttcaatcattaggtgttgccttttatcgtggtgcagattgttgt
gttctagtatatgacgttaccaatttaaaatcatttgaaaacattaaggtgtggagagac
gagtttttattacatgcaaatgttagttccccagaaactttcccctttgttatattgggt
aataaaattgatgtggatgaagccaaaaaagtagttagcgccagacaagctcaagattta
gccaaaggtttaggtgacattcctttattctttactagtgctaaaagctcaataaacgtt
gatatagcatttgaagaaatagctaggagtgccttacaacaaaatcaactagaagacgat
atgttcgaagacgattttaacgatgctatcaatatccaattagataacggaccaagttct
tgtcagtgttaa

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