KEGG   Saccharomycodes ludwigii: SCDLUD_000957
Entry
SCDLUD_000957     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03082  ATP-dependent chromatin remodeling
slud03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SCDLUD_000957
   03083 Polycomb repressive complex
    SCDLUD_000957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:slud03036]
    SCDLUD_000957
Chromosome and associated proteins [BR:slud03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SCDLUD_000957
  Histone modification proteins
   HAT complexes
    HATB complex
     SCDLUD_000957
   HDAC complexes
    Sin3A-HDAC complex
     SCDLUD_000957
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SCDLUD_000957
    PRC2.2
     SCDLUD_000957
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SCDLUD_000957
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SCDLUD_000957
  Chromatin remodeling factors
   NuRD complex
    SCDLUD_000957
   NuRF complex
    SCDLUD_000957
   NuRF complex (fruit fly)
    SCDLUD_000957
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 CAF1C_H4-bd Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML EIF3I WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_CFAP43 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 70106279
NCBI-ProteinID: XP_045937259
LinkDB
Position
I:2239874..2241115
AA seq 413 aa
MKIELLHLNTNYHAMSEELAQPTTIEDEYELWKSNVSLMYDFLSETRLLWPTLTVEWLPS
LETENIRQEFIIGTLTTGAEKNFLKIAAIDLPEEVIKDECNNDNEKDDDTEAGSTHSKIK
IVKKFAHEEEVNRARYMPQNTDLIATINGSGTVFLYDKSKNKQEALVSKFVAHTENGYGL
SFNPNIKNQLLSCSDDKTVALWDITNNKAPLHFIEPHVDMVNDCKWSNFNEALFGSVSED
KHLYLYDTRCTKKNMIIGDIQAESSFNTLSFSKHSHNLFAAAGTDSLVYLYDMRNLSKPL
HAMEGHTDSVSTLDFSPHRDGIILSSGADRRVITWDITQFGAELPPEDAEDGVPELLMMH
GGHRSSVNDFSINPNIPWLVASAEEENILHIWKVSKRLTTTEFTAKYDIKSLE
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaaaatagaactgctacatctgaataccaactaccacgcaatgtctgaagaattggct
cagcctacaactattgaagatgaatatgaattatggaagtcaaacgtttccttaatgtac
gatttcttaagtgaaacccgtttattgtggccaacattaacagtcgagtggcttccatca
ttagaaactgagaacataaggcaagaatttatcattggcacattgacgacaggtgctgaa
aaaaattttttaaagattgcagccatagatttaccggaagaagtaattaaggacgagtgt
aacaatgataatgaaaaggatgacgataccgaagctggtagcacacactctaaaattaaa
attgttaaaaaatttgcacatgaagaggaggttaatagagctagatatatgccccagaac
acagatttgattgcaacgattaatggttcaggtacagtattcttatatgataaatctaaa
aataaacaagaagctttggtatctaagtttgttgcacatactgaaaacgggtacggttta
tcatttaatccaaatattaaaaatcagctattatcatgttcagacgataaaactgtcgcg
ttatgggacataactaataataaagcgcctttgcattttattgagccccatgtagatatg
gttaacgactgtaaatggagcaatttcaatgaagccttgtttggttccgtatctgaagat
aaacatttgtatttatatgatacaagatgcactaaaaaaaatatgataataggggatatt
caagccgagtcttcgttcaacactttatcatttagtaagcattcgcacaatttatttgcc
gctgcaggtactgattcattggtatatttatatgatatgagaaacctatctaagccgtta
catgcaatggagggacacactgactctgtatcaacgctagacttttcgccacatagagac
ggtattatattatccagtggtgctgatagaagagttataacatgggatataacccagttt
ggtgccgaattacctccagaagatgctgaagatggtgttcctgagttattaatgatgcat
ggtggtcatagaagcagtgtcaatgacttttctataaatccaaatattccttggttggtg
gctagtgctgaagaagaaaatattttacatatttggaaagtttctaaaaggctaactaca
actgaattcaccgctaagtatgatatcaagtcattggaatag

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