Saccharomycodes ludwigii: SCDLUD_001052
Help
Entry
SCDLUD_001052 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03015
mRNA surveillance pathway
slud04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SCDLUD_001052
09140 Cellular Processes
09143 Cell growth and death
04113 Meiosis - yeast
SCDLUD_001052
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slud01009
]
SCDLUD_001052
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_001052
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_001052
03041 Spliceosome [BR:
slud03041
]
SCDLUD_001052
Enzymes [BR:
slud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
SCDLUD_001052
Protein phosphatases and associated proteins [BR:
slud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
SCDLUD_001052
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SCDLUD_001052
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SCDLUD_001052
Spliceosome [BR:
slud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SCDLUD_001052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
70106374
NCBI-ProteinID:
XP_045937343
LinkDB
All DBs
Position
I:complement(2433030..2435087)
Genome browser
AA seq
685 aa
AA seq
DB search
MGNSPSKNNVYPDSNTILMNNSSSSTNGSGAGSDDAANNGGEPSDPDDSRLSTIMKYNST
SNRDITYPLTAIKHNDNNNNNNDNNNNNNNNSNANTERGEYYYNNTNTCNNNIFELEMDV
EMAKAFSSFNLNQDIDRNTSNNRTNRKNKLAKNSNRAYPIGTSKRLTSPLDEDGNNNNNN
NNFGLSSVSSSDSSSVSSSTTLLSNSLRRSSESSASSSDSSSTSSGSPNNTTTNRFLPPI
LEEFSSASATTITENFNNKNNDNAHASEDNNPHAINNIIAPSVETSNKHVTKNTKNNFSI
ASLDNTNNPSIFKKGDFFRRSSLKPSITKSTPSSISNSGSSSGSSSVSNGVSSRMSPKIV
SNLRSEKPIILWKNGSNNNPTDSLNIDDCIDKLLKIGETGNSRSRHFSFENWEIQAICLR
AREIFLSEPSLLRLQAPIKVVGDVHGQFNDLLRILKLSGAPHQSGYLFLGDYVDRGKQSL
ETILLLLCFKIKYPNTFYMLRGNHESANVTKIYGFYDECKRRTRSSKTWKVFVDCFNSLP
FAAIINNKIFCVHGGISPQLESLKQISKIQRPTDIPDDGLLTDLLWSDPDPKVNDWKLND
DRGVSYVFGKKNVYDFVSKFDFDLIIRGHMVVEDGYEFFARKKFVTVFSAPNYCGEFNNW
GAVMSVTSGLICSFELLKPRFTKKK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggggaacagcccgtctaagaataatgtatatcccgattcgaatacgatcttaatgaat
aattcttccagctctactaacggttcaggagctggttcagatgatgctgccaataatggt
ggcgaaccatcggatcctgatgatagtcgtttatcgactattatgaaatataattctact
agcaatagggatattacatatcccctaactgcaatcaagcataatgacaacaacaacaac
aacaacgacaacaacaacaacaacaacaacaacagcaacgctaatactgaacggggcgag
tactattataataacaccaatacttgtaacaacaatatctttgaactagaaatggatgtt
gagatggctaaagcattttcctcttttaatctaaatcaggatattgaccgcaataccagt
aataacagaaccaatagaaaaaataaacttgctaaaaatagtaacagggcttatcctatc
ggtacttcgaaacgtttaacgagtcctttggacgaagatggtaataataataataataat
aacaattttggtctttcttctgtatcatcatcagactcctcttctgtttcttcatccaca
actctattatccaactcgctgagaagatcttctgagtcaagtgcctcatcttccgactca
tcatctacttcctctggttcacccaataacactactactaacagatttttacctcctatt
ttagaagagttttcttctgccagtgcaaccactattactgaaaactttaataataaaaac
aacgacaatgcacatgcgagtgaagataacaacccacatgccatcaataatatcattgca
ccatccgttgaaacttctaataaacatgttaccaagaatactaaaaataacttttctatt
gcctccctcgacaacacaaataatccatccatttttaaaaagggtgattttttcagacgc
tcctcattaaagccgtctattaccaaaagcacaccttcttctatcagcaacagtggtagc
agcagcggaagtagtagcgtctctaacggtgtatcgagcagaatgtcgcccaaaatagtt
tcgaatctaagatcagagaaaccgattattttatggaagaacgggagtaacaataatccc
acagactcgcttaacattgatgattgtattgacaagttattgaagatcggtgaaacaggt
aattctagatcaaggcatttttcttttgaaaattgggaaattcaggcgatctgcttaaga
gctagagaaatttttttgagtgagccatctttgttgagattgcaagcacctattaaagtt
gttggtgacgtgcatggccaattcaatgatttgttacgtattttgaaattaagtggtgct
ccacaccaatctgggtatttgtttttgggtgattacgttgatcgtgggaaacaaagtttg
gagactattttgctacttttgtgcttcaaaattaaatacccaaacactttttacatgttg
aggggtaaccacgaatccgcaaatgttaccaagatatacgggttttatgatgaatgtaaa
aggaggacaagaagtagtaagacttggaaagtgtttgtagactgctttaattcattgccg
tttgctgcaatcattaacaacaagattttttgtgttcatggtgggatttcaccacagttg
gagagtttaaaacaaattagtaaaatccaaagaccaacagatattcctgatgacggacta
ttaaccgatttgttatggagtgaccctgatccaaaagtcaatgattggaagctaaacgat
gatagaggcgtttcttatgtttttggcaaaaagaatgtttatgactttgtgtctaaattt
gattttgatctaattattcgaggtcatatggttgttgaagatgggtatgagttttttgcc
agaaagaaatttgttactgtttttagtgctcccaattattgtggtgaatttaataattgg
ggtgccgtaatgagtgtcactagtggcttgatatgtagttttgaattgttaaaaccaaga
tttaccaagaagaaatga
DBGET
integrated database retrieval system
