Saccharomycodes ludwigii: SCDLUD_001126
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Entry
SCDLUD_001126 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K17302
coatomer subunit beta'
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_001126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slud04147
]
SCDLUD_001126
Membrane trafficking [BR:
slud04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SCDLUD_001126
Exosome [BR:
slud04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SCDLUD_001126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
BBS2_Mid
WDR54
Beta-prop_Vps41
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
70106448
NCBI-ProteinID:
XP_045937414
LinkDB
All DBs
Position
I:complement(2590965..2594037)
Genome browser
AA seq
908 aa
AA seq
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MKLDIKKAFTARSDRVKAIDFHPLQPWILITLYSGRAEIWNYETQQQVRSIDVTAVPVRA
GKFIARQNWIVVGSDDFKIRVYNYNTGEKVADFEAHPDYIRSLAIHPTLPYLLSASDDTT
IKLWNWEKNWNLEQTFEGHQHFVMSVAFNPKDPNTFASACLDHTVRIWSLGKNVPNFSIT
AHETQGVNYVDYYPLQDKPYLITCSDDRTVKVWDYQTKSCVSTMEGHLTNVSYAIFHPTL
PIIISGSEDSTIKIWNSNTYKLEKTLNLGLERSWCIAAHPQGKRNYIASGFDDGFTLLSM
GNDEPKLSLDPVGKLVYCGGKPGSSISDVFTAVIRGNEQVEDGDILPLQTKELGSVEVFP
SKLQHSPNGRFVAVTGDGEYIVYTALAWRNKAFGKCSDFVWAPDSNSYVIIDENGALQLY
KNFKKFKELKIDVPDSTEKLFSGPFLGIKSSDGFILFYEWETGNLVRRIDVNARDVFWSD
NDELVMLTTGSKENEQQGGYVLEFNKDVFEENVSKGEITEDGVEDCFDVLYEVPDLIKSG
KWVGDVFIYTSETDRLNYFVGGKTYNLAHFERPMYLIGYLARDSRIYVADKEINVFSYKI
SIEVLEFQTLVLRGELQEALDTVLPNVEGKDNLMKLSRFLEGQELFKEAYQVSADDEQKF
FLALKLGYLQEAFDLIKNDESEHKWRTLGDSALKEFNFKLAIQSYEKANDTESLFLLYSS
FNMKDKLNELGETAEAEGKFNVAFNSYWTAGNLTAVQNLLVSIGRIPEAAMFGLTYGQDS
KQINSLVEIWKEKLTLDDKKKIADRISLYGDDEGFPKYSATSEPLIDLGESAVAVKEEDI
EPIVEHTEKEDVDAAVQKCTGSEEVAEDQSSEQLEKKELSTNEVEKPEQEEKLEQEEKLE
QEEKLEQE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatattaagaaagcttttactgcaagatcagatagagttaaagccatagat
tttcatccactacaaccttggatattgattaccttatattcgggccgcgctgaaatttgg
aactatgaaacacaacagcaagttagaagtattgatgtaactgcagttccagttagagca
ggtaaattcatagctagacaaaattggattgtcgttggatccgatgattttaagattaga
gtttataattataatactggagaaaaagttgcagattttgaagcacatccagattatatt
cgttccctagccattcatccaactttaccttatttactatctgctagcgatgatactact
attaaattatggaattgggagaaaaattggaatttagaacaaacttttgaaggtcatcaa
cattttgtgatgtctgttgcatttaatccaaaagatccaaatacctttgcatctgcttgt
ttagaccatactgttagaatttggtctttaggtaaaaatgttccaaatttttctatcacc
gcacatgaaacacaaggtgttaactatgtagattattatccactacaagacaaaccatat
ttaatcacctgttctgatgaccgcactgttaaagtttgggattaccagaccaaatcttgt
gtttctacaatggaaggtcatttaaccaatgtttcatatgccattttccatccaacatta
cccatcattatttctggatcggaggatagtaccattaaaatttggaatagcaacacatac
aaactagaaaaaaccttgaatttgggattggaaagaagttggtgtattgctgctcatcca
caaggtaaaagaaattatattgcttctgggttcgatgatggattcactttattatctatg
ggtaacgatgaaccaaaattgtctctggatccagttgggaaactagtttattgtggcggt
aaaccaggttccagtatttccgatgttttcactgctgtaatcaggggcaacgagcaggtg
gaggatggtgacattttacctttacaaaccaaagaattgggctctgtcgaagttttccca
tcaaaattgcaacattctcctaatggcagatttgtcgccgttactggtgatggcgaatat
atcgtttacactgctttggcttggagaaacaaggcctttggtaaatgctctgattttgtg
tgggcacctgattccaactcttatgtgattattgatgaaaatggtgcattgcaattgtac
aagaatttcaagaaattcaaagaactaaagattgacgtgccagattcaaccgaaaagtta
ttttctggaccatttttaggtattaagtcttctgacggatttatactattttatgagtgg
gaaacaggtaacttggtcagacgtatcgatgtgaatgcacgtgatgttttttggtctgat
aatgatgaactagttatgcttactaccggttccaaagaaaatgaacaacaaggtggatat
gtcttggaatttaacaaggatgtatttgaagagaatgtttccaagggggaaattacagaa
gatggggtagaagactgttttgatgttttgtatgaggttcctgatttaatcaagagtggt
aaatgggttggcgatgtttttatttatacttctgaaactgatagattgaactattttgtt
ggtggcaaaacatacaatttagcccattttgaaagaccaatgtatttaattgggtattta
gcaagagatagcaggatatatgttgctgataaagaaataaatgttttcagttacaaaatt
tcgattgaagttttggaattccaaacattagtgctaaggggtgaactacaagaggctttg
gacactgttttgccaaatgttgagggcaaagataatctaatgaaactatccagattttta
gagggccaggaattattcaaggaagcatatcaagtttcagctgacgatgaacaaaaattc
tttttagctttaaaattgggttatttacaagaagcttttgatttaattaaaaatgatgaa
agtgaacataaatggagaacattgggtgattctgcattaaaggaatttaattttaaacta
gccattcaaagttatgaaaaagcaaatgatacagagtctctatttctactatattcttct
tttaacatgaaagataaattgaatgaattgggggaaaccgctgaagctgaaggcaaattt
aatgttgcatttaattcttattggacagctggcaatttgactgctgttcaaaatttattg
gtatctattggaagaatacctgaagctgccatgtttgggttaacatatggtcaggattcc
aagcaaataaattcgttagttgaaatttggaaagaaaaattaactttagatgataagaaa
aaaattgcagatagaatcagtttatatggcgatgacgaagggtttccaaaatatagtgca
acctctgaaccattaattgatttgggagagtcagccgtagctgtgaaagaggaagatatt
gagccaatagtggaacatactgaaaaggaagatgtggatgctgctgttcaaaaatgcact
ggttcagaagaagtggctgaagatcaatcaagtgaacaattggaaaaaaaagaactttca
actaacgaagttgaaaaacctgaacaagaagaaaaacttgaacaagaggaaaaacttgaa
caagaggaaaaacttgaacaagaataa
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