Saccharomycodes ludwigii: SCDLUD_001249
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Entry
SCDLUD_001249 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud00100
Steroid biosynthesis
slud00909
Sesquiterpenoid and triterpenoid biosynthesis
slud01100
Metabolic pathways
slud01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
SCDLUD_001249
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
SCDLUD_001249
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slud01006
]
SCDLUD_001249
Enzymes [BR:
slud01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
SCDLUD_001249
Prenyltransferases [BR:
slud01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SCDLUD_001249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
70106571
NCBI-ProteinID:
XP_045937533
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All DBs
Position
I:complement(<2878672..>2879991)
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AA seq
439 aa
AA seq
DB search
MGKVSQLISHPIELKSALKLKFLRQPLFPTDDTSATPELKKCYKLLNLTSRSFAAVIMEL
NPELRNSIMLFYLILRALDTVEDDMSIDPKVKVPVLREFASKLETSDWKFEGCAPTEKDR
QVLLDFPCILKEYHKLKPEYQKVIKDITYKMGNGMADYILDENFNLNGVATIKDYDKYCH
YVAGLVGDGLTQLIVLANFGTPDLYNENKQLMESMGLFLQKTNIIRDYAEDLNDGRSFYP
QEVWCKYVKRLPDLAKNEDGKGVYCINDLVLNALSHVNDVLTYLSSIHEQSSFQFCAIPQ
VMAIATLALVFNNETVLHDNVKIRKGTTCYLILKSRTLKGCVEIFQYYLREIKSKLTVVD
PNYLKINIQIAKCEQFIEEMYQDKLPPNVKPLETPIYLKVREKTKIDERLIPVLQNEEFK
FNIILSMVVTAFAAIYFYH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtttcacaactaatctctcatccaatcgaattaaaatctgctttaaaatta
aaatttttacgtcagccattatttccaacagatgacacttcagctactccagaattgaaa
aaatgctataaattgttaaacttaacttctaggtcttttgcagcagtgattatggaatta
aacccagaattacgcaattcgatcatgttattttacttaattctacgtgcattagatact
gttgaggatgacatgagtattgatccaaaggtcaaagttcctgttttgagagagtttgct
tccaaattagaaacttctgattggaaattcgaaggctgtgctcccactgaaaaagatcgt
caagttttgctcgattttccttgtattttgaaagaatatcataaattaaaacccgaatat
caaaaagttattaaagatattacctataagatgggcaatggtatggctgattatatttta
gatgaaaatttcaatttaaacggggttgctaccataaaagattatgataaatactgccat
tacgttgctggtttggttggtgatggattaacccaattaattgttttagccaattttggt
acccctgatttatataatgaaaataaacaactaatggaaagcatggggctatttttgcaa
aaaactaatataattagagattacgcagaagatttaaatgacggccgttccttttatcct
caagaagtttggtgtaaatacgtcaagcgtctaccagatttggctaaaaatgaagatggt
aaaggtgtatattgtatcaatgatttggtcctaaacgctttgagtcatgttaacgatgtg
ctaacttatctaagttctattcacgagcaatcaagtttccaattttgtgctattcctcag
gttatggctattgctacattggctttagtttttaataacgagactgttttacatgataat
gttaagattagaaagggaactacctgttatttaattttaaaatcaagaacattaaagggg
tgtgtggaaattttccaatattatttacgtgaaattaaatctaaattaactgttgttgat
ccaaattacttgaaaataaatattcaaattgcaaaatgtgaacaatttattgaagaaatg
tatcaggacaagttgcctcctaatgtcaaaccattagaaacccctatttatttgaaggtt
agggaaaagactaaaattgatgaaagattaatacctgttttacagaatgaagaatttaag
tttaatattattctaagtatggttgttactgcatttgcagccatatatttctatcactga
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