Saccharomycodes ludwigii: SCDLUD_001363
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Entry
SCDLUD_001363 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCDLUD_001363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_001363
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SCDLUD_001363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_33
AAA_14
TIP49
AAA_28
nSTAND3
ABC_tran
RNA_helicase
AAA_18
NPHP3_N
AAA_17
Vps4_C
AAA_2
Rad17
Mg_chelatase
Cytidylate_kin2
AAA_3
IstB_IS21
NB-ARC
Zeta_toxin
SKI
NACHT
Viral_helicase1
TsaE
AAA_7
Parvo_NS1
DUF815
Sigma54_activat
AAA_19
DUF5906
Cytidylate_kin
CPT
RsgA_GTPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
70106685
NCBI-ProteinID:
XP_045935532
LinkDB
All DBs
Position
II:144961..147552
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AA seq
863 aa
AA seq
DB search
MVKFKTKKTGVSLTQALDNKIENLIYRMLDERSLEKQRLNNQKVKQNVSPKESEDDIEED
DLFPDIYLAKDLIFGEVVGYVLSKDLSLQRVKKVVLERVVDKMLKIIIAKEAEEIDINKD
QEKQEQDSAEDNNEPETNLTSQNLMIDEDTTNSFNKDITQHWNVKPLVLANDESSENNAS
SPNNVTANNNNNSNKKKRSNGGILLNERSSKTKKSKIDRAPPAINLSILGGMDDVVAQLM
ELIGLPILHPEIYSSTGVEPPRGVLLHGPPGCGKTTIANALAGELQVPFISVSAPSVVSG
MSGESEKKLRDLFDEAKSLAPCLVFLDEIDAITPKRDGGAQREMERRIVAQLLTSLDDLS
FEKTDGKPVIVIGATNRPDSLDPALRRAGRFDREICLNVPNEYSRIHILQKVVSRLKTDG
EIDFVKLAKLTPGFVGADLKALATAAGICAIKRIFSTFGQLSDDDSMDIDSAGVNSQADM
KNTPNMIDPLPLDIIQRFIANFPKPLTDEQLSTVSIRYEDFLKALPNIQPTAKREGFATV
PDVTWDNIGALKKTRIELNMAIVQPIKRPELYEKVGITAPAGVLLWGPPGCGKTLLAKAV
ANESRANFISIKGPELLNKYVGESERSIRQVFTRARASIPCVIFFDELDALVPRRDSTMS
ESTSRVVNTLLTELDGLSSRRGIFVIGATNRPDMIDPAMLRPGRLDKTLFIELPNSEEKL
DILKTLVSCNGTPLAPDVILEDIVKNKRCNNFSGADLAALIRESSILALKRNFFKNNEIQ
SVKDNNLDKEFENLTTGDSDNEVILVTLKDFQNALNKIKPSVSDRDRLKYDRLNKKMGWI
QEQDEEEKEDDGNNNIKSESVVD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaattcaagacaaagaaaaccggggtatcattaacccaagctttagacaacaaa
attgaaaatttgatttataggatgctagatgaaagatcattggagaaacagagattaaat
aatcaaaaagtcaaacaaaatgtatcaccaaaagaaagcgaagacgatattgaagaagat
gatttatttccagatatttatctagccaaggatttgatttttggtgaggtagtaggctat
gttttatccaaagatttatccttgcaaagggttaaaaaagttgttttggaacgtgtagtc
gacaaaatgttaaaaatcattattgccaaagaagctgaagaaatcgatataaacaaggat
caagagaaacaagaacaggatagtgccgaggacaacaatgagcctgaaacaaatttaact
tcacaaaacttgatgattgatgaagatacaaccaatagttttaataaagatatcactcaa
cattggaatgttaaacccctagtattagccaacgatgaatccagcgagaataacgcttct
tcgcctaataatgtcactgctaataataacaataacagcaacaaaaaaaaacggagtaac
ggaggaattttattaaatgaacgctcatctaaaaccaaaaaaagtaaaattgatagggca
ccacccgcaattaacttatccattttgggtggtatggatgacgtcgtcgcacaattaatg
gaattaatcggcttacccatattacacccggaaatttatagcagtacgggtgtagaacca
ccgcgtggtgttctattacatggtccccctggatgtggtaaaaccactattgccaacgct
ttagctggggaattacaagttccctttatttctgtatcagcaccctcagtggtaagtggt
atgagtggggaaagtgagaagaaacttagggatttatttgacgaggccaagagtttagca
ccttgtttagttttcttggacgaaattgatgccattaccccaaaaagagatggtggcgct
cagagggaaatggagagaagaatagttgctcagttattaacctcacttgatgacttatcc
tttgaaaaaactgacgggaagcctgtaatcgttattggtgctaccaataggcctgattct
ttggatcctgcattgagaagggctggtaggtttgatagagaaatttgtctaaacgttcca
aatgaatatagtagaatacatattttacaaaaagtggtttcaagattgaaaactgatgga
gaaatagattttgtcaaactagccaaattaacaccggggtttgtaggagcagatttgaaa
gccttggctaccgctgcaggtatttgcgctataaagaggatttttagcacttttggacaa
ttatctgatgatgactccatggacattgacagtgctggagttaatagtcaggctgatatg
aaaaatactccaaacatgattgatccattgcccttagatataatacagagattcattgcg
aattttcccaaacctttaacagatgaacaattatccacggtgtctatcagatatgaagat
tttttgaaagctttgccaaatatacagccaactgcaaaaagagaaggttttgccactgtc
cctgacgtaacttgggataatattggtgccttgaaaaaaacccgtattgaattgaatatg
gcaattgttcaacctataaagagaccagagttatatgaaaaagtgggcattactgcgcca
gctggtgttttgttatggggtcctccgggctgtggtaaaactttattggcaaaagctgtt
gccaacgagtctagagctaattttatatctattaagggccctgaacttttgaacaaatat
gtaggtgaaagtgaaagaagcataaggcaggtattcacaagagctagggcttccattccg
tgtgttatattttttgatgaactggatgctttagtcccacgcagagactctacaatgagc
gaatcgacctcgagagtggtgaatactttattaactgaattggatggactaagtagtaga
agaggtatttttgttattggtgctactaacagaccagatatgatcgaccctgccatgtta
agacccggtaggttggacaaaacattgtttattgaattacctaattcagaagagaagtta
gatattctgaaaaccttggtcagttgcaatggtactccactggcacctgatgttatttta
gaagatattgttaaaaataaacgctgtaacaatttttcaggcgcagatctagccgcttta
atcagagaaagttccattttagctttgaaaagaaatttttttaaaaacaatgaaatacaa
tctgttaaggacaataatttagacaaagagtttgaaaatcttactacaggcgatagtgat
aatgaggtaatattggttactttaaaagatttccaaaatgcgctaaacaagataaagcca
tcagttagcgatcgggatagattaaaatatgataggttgaataagaagatgggctggatt
caagaacaagacgaagaagaaaaagaagatgacggtaataataatattaaatctgaaagt
gttgtggattaa
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