Saccharomycodes ludwigii: SCDLUD_001391
Help
Entry
SCDLUD_001391 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03015
mRNA surveillance pathway
slud04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SCDLUD_001391
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
SCDLUD_001391
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slud01009
]
SCDLUD_001391
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_001391
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_001391
Protein phosphatases and associated proteins [BR:
slud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
SCDLUD_001391
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
SCDLUD_001391
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
SCDLUD_001391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
SR-25
IMUP
Motif
Other DBs
NCBI-GeneID:
70106713
NCBI-ProteinID:
XP_045935558
LinkDB
All DBs
Position
II:complement(224368..225963)
Genome browser
AA seq
531 aa
AA seq
DB search
MSLDNFDFKFSQCFGDKADIVVTEADIITAVEFASTGDYLATGDRGGRVVLFERNNNTKH
CEYKFMTEFQSHDAEFDYLKSLEIEEKINQIKWCKPTNKAHFLLSTNDKTIKLWKIYEKT
IKLVAENNLSIATTTTTTTNNNISSNSRNGFFSGFGSSNNSITPSGNSTTTLSYQSLKLP
RLTQHDKIIAASPKRIYANAHTYHINSISPNSDGETFISADDLRINLWNFDIPDQSFNIV
DIKPANMEELTEVITSAEFHPFHCNLFMYASSKGTIKLCDMRTNSLCDYQSRTFEEYTDP
ISHNFFTEITSSISDVKFSPNGRYIASRDYLTVKIWDVNMDNKPVKTINIHDQLKERLSD
TYENDAIFDKFEVCFGGDSSSVMTGSYNNNFFIYPNAATTGESTTSGITSNSNTTGSSSS
SSSSSSSSSLSNGTNAATIAANAKKSSNQVIRLQADKNAFKTSNENDKIGTGDNMSNGFW
DTNSNNNNNNNSGFLQDDIDFKKSILHFSWHPSENSVAIAATNNLFIFSSL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggataattttgattttaagtttagccaatgttttggcgacaaagctgatata
gtggtgactgaagccgatataattacggccgttgaatttgctagtacaggtgattattta
gccacaggtgatcgtggcgggcgagtagtgttgtttgagagaaataataataccaagcat
tgtgaatacaaattcatgactgagtttcaaagtcatgatgccgaatttgattacttaaag
tctttagaaattgaagaaaaaatcaatcaaatcaaatggtgcaaaccaaccaataaagca
cattttttattatctactaacgacaaaaccattaaactatggaaaatctatgaaaaaacc
atcaaactcgtggccgaaaataacctaagtatagcaaccaccaccactaccactacaaac
aacaatatatcaagtaatagcagaaatgggttttttagcgggtttggttctagtaacaat
agcattactcctagtgggaatagtactactactctgtcgtaccaaagtttaaaattaccc
agattaactcaacacgataaaattattgctgcatccccaaagagaatctatgccaatgct
cacacataccatattaattctatttctcctaacagcgacggcgaaacttttattagtgca
gatgatttgagaatcaatttatggaattttgatataccagatcagtcttttaatattgta
gatattaaacccgccaatatggaagagctaactgaggtcatcactagcgctgaattccat
ccgtttcattgcaacttatttatgtatgccagtagtaaaggtactataaaattatgcgac
atgagaaccaactcattatgtgactaccaatcaaggacttttgaagagtacactgaccct
ataagtcataattttttcacagagattacttcctctataagtgatgttaagtttagtcct
aacggaagatatattgcctctagagattacctaactgtcaaaatttgggacgtcaatatg
gacaacaagccagttaagaccattaacattcatgaccaattgaaagaacgcttgagcgac
acatatgaaaacgatgctatttttgataaatttgaagtttgttttggcggtgactcctca
agtgtaatgactggtagctataacaataatttctttatttatccaaatgcggcaacaaca
ggagaatctactactagtggtattaccagcaacagtaacactactggttcatcatcatca
tcatcatcatcatcatcatcgtcatctttatctaacggcacaaatgctgcaactattgct
gccaacgcaaagaaaagtagtaaccaagttataagactacaggccgataaaaatgcattc
aagacttccaacgaaaacgataaaattggtacaggcgacaatatgagcaatgggttttgg
gatactaatagtaacaataataataataacaacagcgggttcttacaggatgacattgat
ttcaaaaagagtatattgcatttttcatggcatccaagtgaaaatagcgtggctattgct
gctacaaacaacttgtttatattttcatcattataa
DBGET
integrated database retrieval system
