Saccharomycodes ludwigii: SCDLUD_001443
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Entry
SCDLUD_001443 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SCDLUD_001443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_001443
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
SCDLUD_001443
U7-dependent histone pre-mRNA processing factors
SCDLUD_001443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF_C
RRM_10
RRM_occluded
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
70106765
NCBI-ProteinID:
XP_045935606
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Position
II:<348893..>349753
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AA seq
286 aa
AA seq
DB search
MDNKPSNIVYLGNIPFDQTEEQILDLCSNVGPVRGLKMMFDPNTGKSRGFCFIEFNDINT
SSSAVRNLNGYQLGSRTLKCGFSDEGSTSVTATAVNNGRSNTNSGINNSANNNTGPNQKL
PIFSYQGKVVNCDNIGIDINTTMTTPAMMLSSILANNYGKEKQLKVLDLLKQESSEAENS
ITLKLLLTFPQLNFALAEILLSNGLSTVEDLSKLAITNNDSISDKNGSEEGKQNQENPRK
YKKTQLGLLKQVLQLNDTDISMLPPDEKIIIYDLKQRAMKGDFGPI
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggataataaaccatctaacatagtctatttggggaatatcccatttgaccaaacagaa
gaacaaatattggatttatgtagtaatgtgggaccagtcagaggtttaaaaatgatgttt
gatccaaacacaggtaagtcaagagggttctgttttatagagtttaatgatataaatacc
agtagcagcgctgttagaaatttaaatggatatcaattaggttctcgtacattaaaatgt
gggttttcagatgagggaagcacatcagtaacagcaactgctgttaataatggtcgttct
aatactaatagtggtattaataattccgccaataacaataccgggcctaaccaaaaacta
ccaatattttcttatcaaggtaaagtagtaaattgtgataatataggcatagacataaat
acaacaatgacaacgcctgcaatgatgctttctagtatattagcgaataattacgggaag
gaaaaacagttaaaggtattagacttgctaaaacaagagagtagtgaggctgaaaacagt
atcactttgaagctgttattgacatttcctcaattgaattttgctttggctgaaattttg
ttgagcaatggattaagtacagtagaagatttatccaagctagctataacaaataatgac
agtataagtgataaaaatggcagtgaagaagggaaacaaaaccaagagaatccacgcaaa
tataaaaaaacgcaactaggtttattgaaacaagttttacaattaaatgacacggatatc
tccatgttaccacccgatgaaaaaatcatcatatacgatttgaaacaaagagctatgaag
ggagattttggacctatataa
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