Saccharomycodes ludwigii: SCDLUD_001506
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Entry
SCDLUD_001506 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03030
DNA replication
slud03420
Nucleotide excision repair
slud03430
Mismatch repair
slud03440
Homologous recombination
slud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCDLUD_001506
03420 Nucleotide excision repair
SCDLUD_001506
03430 Mismatch repair
SCDLUD_001506
03440 Homologous recombination
SCDLUD_001506
03460 Fanconi anemia pathway
SCDLUD_001506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slud03000
]
SCDLUD_001506
03032 DNA replication proteins [BR:
slud03032
]
SCDLUD_001506
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_001506
Transcription factors [BR:
slud03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SCDLUD_001506
DNA replication proteins [BR:
slud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SCDLUD_001506
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SCDLUD_001506
MMR (mismatch excision repair)
SCDLUD_001506
DSBR (double strand breaks repair)
HR (homologous recombination)
SCDLUD_001506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
70106828
NCBI-ProteinID:
XP_045935666
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All DBs
Position
II:486770..488647
Genome browser
AA seq
625 aa
AA seq
DB search
MSHSISKGELFSIFTKEEKFKNPTGGVFKILSVKKNDRERKSCLFVIYDGEYNTKCLFKD
AAFEKAFESNLEPGNVFRVLVASTAVLPQKKKCVLVVEDVEILEKNRLPPNQQTGIFLDS
YLFEHPELSAVPEFRGAGFNAQPNKGAPQPPQINPTKPLQQHSVVSNNYQQQQHNNNINN
HNHNNGSTSDSQKRPIFAIEQLSPYQNLWTIKARVSYKSDIRTWRNQRGEGKLFNVNFLD
ETGEIRATAFNDNAEKYFEILQEGKVYYVSKARVQPSKPQFSHLKHPYELQLDRDSVVEE
CMDDQGNVPQLHFDFVKLSSVENTEPNSVVDVMGIIQEITPVFQINSKAGKTYDRRDITI
VDDSGYSISLGLWNNLAVDFNLPEGSVIVAKGVRVSDFNGKSLSMTPNGNIYSNPETPEA
FALKGWYDSQGKSSTFHSLKQEFSRRDNIAERKTIRAAEEENLGASERGDYFNIKAAITY
VRTDNFCYPGCSSPNCAKKVIETSDGSWRCEKCDATYPTPNYRYTLSISVLDETGQMWLT
LFNEQAETLLGVSANKLMEIKENSDTEFNDIIQKVQMCEFDFRIRARQDTYNDVQKIRYS
AATISRLNFKAEADYLAKELSKVNI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattcaatctctaaaggtgaattattttctatttttacaaaagaagagaagttt
aaaaatccaactggtggcgttttcaaaattcttagtgtcaagaaaaacgatagagagagg
aagagttgtttatttgtaatatatgatggcgagtataatacaaaatgtttatttaaagat
gctgcttttgaaaaagcctttgagagcaatttggaaccaggaaatgttttccgtgttctt
gttgccagtaccgctgttttaccacaaaagaaaaagtgtgttttagttgtagaagatgta
gaaattttagaaaaaaaccgtctacctccaaaccaacaaactggtatatttttagattca
tatttgtttgaacatcccgagttgagtgcggttcctgaattcagaggcgctggttttaat
gctcaaccaaataaaggggctcctcaaccaccccaaataaaccctacaaaaccattacaa
caacactctgttgtttcgaataattaccaacaacaacaacataataataatattaataac
cataaccataataacggatctacttcagattctcaaaaaagacctatctttgccattgaa
caattaagtccataccaaaatttatggactattaaggctagagtatcgtataaatccgat
attagaacctggagaaaccaaagaggcgaaggtaaattatttaatgtcaacttcttggac
gaaactggcgaaattagggccactgcattcaatgataacgctgaaaaatactttgagata
ctacaagagggcaaagtctattatgtttctaaagccagagtgcaaccatccaaaccacag
ttttctcatttaaaacacccctacgaattacaattagacagagatagtgttgttgaggaa
tgcatggatgatcaaggtaatgttcctcagctacatttcgattttgtaaagctaagttct
gttgaaaacacggaaccaaactctgttgtggatgttatgggcatcattcaagagatcacc
cctgtttttcaaatcaactcaaaagccggtaaaacctatgatcgccgtgatattaccatt
gtggatgactctggttactcaatttctcttggtttatggaataatttagctgttgatttt
aatttgccagaaggatcggttatcgttgcaaagggggttagggttagtgacttcaacggc
aaaagcttgtcaatgaccccaaacggcaacatctattcaaacccagaaacccctgaagcg
tttgctctaaaaggttggtacgattctcaaggtaagagttctacattccattctttgaaa
caagagtttagcagaagggataacattgctgagcgtaaaacaattagggctgccgaagag
gaaaacctgggtgcaagtgagcgtggcgattactttaacattaaagcagctattacatat
gtaagaaccgataatttctgttacccagggtgttccagtcctaattgcgccaaaaaagtt
attgagacgtctgatggttcttggagatgtgaaaaatgtgatgctacttacccaactcca
aactatagatacaccttaagcatatctgtcctagatgaaactggtcaaatgtggttgact
ctatttaatgaacaagctgaaactttattaggcgttagtgctaataaattgatggaaatt
aaagaaaattcagataccgaatttaacgatataattcaaaaagttcaaatgtgtgagttt
gatttcagaataagagctcgtcaagatacatacaatgacgttcaaaagattagatacagt
gccgcaaccattagtagattgaatttcaaagcagaagctgattatttggctaaagaactt
tccaaagtgaatatttga
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