Saccharomycodes ludwigii: SCDLUD_001566
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Entry
SCDLUD_001566 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_001566
Enzymes [BR:
slud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCDLUD_001566
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
90S particles
Helicases
SCDLUD_001566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
70106888
NCBI-ProteinID:
XP_045935720
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All DBs
Position
II:624128..626008
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AA seq
626 aa
AA seq
DB search
MDIFRVLTRGANINKRKQLLSNNTNKNDANNELQREQKKKEDQITKELDFFHNKKIVTKV
INNNATDADTNSTAISQDTATATDNDDVIPPKINSKEDAIKLRKSYKGKVTTGNLIGTSK
NNDLDFNASLPIGSFEDLITRFKFNKKLLDNLIVNGFTEPTPIQCESIPNTLSGKDILAC
APTGSGKTLAFLIPMVQQVLDECNNNNNNNNNNNNNTGNSGLKCLIISPTKDLANQIYTE
CMKLAANILVTGPNEDNTSDKKNKKRSLNIGILSKSLAAKLKNRVVSSKKYDILISTPLR
LIDTMGITSTNSIAGSNINDGHLANTDCPLDLSGVKHLIFDEADKLFDKTFIQQTDTILA
CCTSSTLQKSMFSATIPSNVEEIASSIMSVSMVRIIIGHKEAANSNINQQLIYCGNEEGK
IIAIRQLIQNGEFKPPVIIFLESITRAKALYHELLYDKLNVDVIHSERTQLQRNKIIESF
KNGGLWVLICTDVLSRGLDFKNVNLVINYDVPTSAQNYVHRIGRTGRNGKSGKAVTFYTK
QDSLSIKPIINVMKQSGCEIAPWMENMSKLTKKEKNIVKRGVSNRKQISSVPKIIKHKKR
QRFEMVEASKKRKMMDNGRSTDIEDK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatattttcagagtattgactagaggcgcaaatattaacaagagaaaacagttacta
tcaaataatacgaataaaaatgatgcaaataacgaacttcaacgagaacaaaaaaaaaaa
gaagatcagatcacaaaagaattggatttcttccataataaaaaaatcgttacaaaagtc
ataaataataatgctactgacgctgacaccaacagcaccgccatttcacaagatactgca
actgccaccgataatgacgacgttataccacctaaaatcaatagcaaagaggatgcaatt
aaattacgtaaatcatacaagggtaaagtcacaacaggtaatttaataggtacttctaaa
aacaatgatttggacttcaacgcttcgttgccgattggttcatttgaagatttaattaca
aggtttaaattcaataaaaagttgttggataatttgatagttaatgggtttactgaacca
actccaatccaatgtgaaagtattccaaacacgttaagcggcaaagatattttagcctgc
gctccaactggttcaggtaaaactttggcatttttaataccaatggtacaacaagtttta
gatgaatgtaataataataataataataataataataataataataataccggtaatagt
ggcttgaaatgtctaattatttcacctaccaaggatttagccaaccagatatataccgag
tgcatgaaattagcagcaaacattttagtaacaggtcctaatgaagacaatacatccgat
aagaaaaataagaagagaagtttgaatattggcatactatccaagtctctagccgctaaa
ttgaaaaatagagttgttagtagcaagaaatatgacattttgatttccactccgttgaga
ttaatcgatacaatggggattactagcaccaattctatagccgggagtaacattaacgat
gggcacctagccaatacagactgtcccttggacttgagtggtgttaaacatttaattttt
gatgaagccgataagctatttgataaaacttttattcagcaaacagatactatattggct
tgctgcacatcctctactttacaaaaaagtatgttttctgctactattccctctaatgtt
gaagaaattgcctctagcattatgtctgtgtctatggttaggattattattggtcacaaa
gaggcagccaatagtaacatcaaccaacaattgatatattgtggtaacgaagaaggtaag
attattgcaatcagacaattaatccaaaatggagagttcaagccgccagttataattttc
ttggaatcaattacgagagcaaaagcgctatatcacgaactattatatgataaattgaac
gttgatgttatacattccgaaagaacgcagttacaaaggaacaaaatcatcgaaagtttt
aaaaacgggggtttatgggtgctaatctgtactgatgttttaagtagaggtttagatttt
aaaaacgttaacctagtcataaattatgatgttccaacatctgcacagaattatgtgcat
agaattggtagaactggtagaaatgggaaatcgggaaaagcagtaacattttacaccaaa
caagattctttaagtattaagccaattattaatgttatgaaacaaagtggttgtgaaata
gctccttggatggaaaatatgagtaaattgacaaaaaaggaaaaaaacattgttaaaaga
ggtgttagtaatagaaaacaaattagctctgtgcctaaaataataaaacataagaaaaga
caaagatttgagatggttgaggcatcgaaaaaaaggaagatgatggataatgggcgtagt
acagatattgaagataaatga
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