Saccharomycodes ludwigii: SCDLUD_001627
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Entry
SCDLUD_001627 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCDLUD_001627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slud03000
]
SCDLUD_001627
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_001627
Transcription factors [BR:
slud03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SCDLUD_001627
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SCDLUD_001627
RNA polymerase III system
TFIIIB
SCDLUD_001627
RNA polymerase I system
SL1/TIF-1B
SCDLUD_001627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
70106949
NCBI-ProteinID:
XP_045935777
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All DBs
Position
II:766237..767043
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AA seq
268 aa
AA seq
DB search
MSEEEDQRLKDFKKTNSIVFDEATRKVWESENNTEPNGPNEIENTNNTKIEGSSSASTAF
GVNTTEPSINAKNEEVEDRHNDQADDTTSGIVPTLQNIVATVDLDCRLDLKTVALHARNA
EYNPRRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFSAKF
TKFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKI
VLTGAKKREEIYQAFEAIYPVLSEFRKL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaagaagatcaaagattaaaagattttaaaaagacaaacagcattgtgttt
gatgaagctaccaggaaagtctgggaaagtgaaaacaatactgaacctaatggtccaaac
gaaatagaaaatactaataacaccaagatagaaggttcttcatctgcttctacggctttt
ggtgtaaataccacggaacctagcataaacgccaaaaatgaagaagtagaagacaggcat
aacgatcaggctgatgatactacctctggtattgttccaacattacagaatatagttgcc
acagttgatttagattgtaggttagatttgaaaaccgtagcattacatgcccgtaatgca
gaatataatccaagaagatttgctgccgttatcatgagaatcagagagcccaaaacaacg
gctttaatatttgcaagtggtaagatggttgtaactggtgccaaaagtgaagatgattct
aaattagctagtagaaaatatgcaagaattattcaaaagattggatttagtgctaagttt
acaaagtttaaaattcaaaatattgtgggctcatgtgatgttaaattccccattagattg
gaagggttggcatttagtcatggtaccttttcaagttacgaacccgagttatttcccggt
ttgatttacagaatggttaaacccaaaattgttttattaatttttgtttctggaaaaatt
gttttaacaggtgccaaaaagagggaagagatttatcaggcttttgaagctatttatcct
gttttaagtgaatttagaaaattgtaa
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