Saccharomycodes ludwigii: SCDLUD_001671
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Entry
SCDLUD_001671 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCDLUD_001671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_001671
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SCDLUD_001671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND3
nSTAND_NTPase5
DUF5344
3HCDH_N
AAA_21
Motif
Other DBs
NCBI-GeneID:
70106993
NCBI-ProteinID:
XP_045935820
LinkDB
All DBs
Position
II:complement(<873114..>876857)
Genome browser
AA seq
1247 aa
AA seq
DB search
MTPSYLKHIKQTPPSSKKKLKQSTLLGFFSSSKKSGSSPSNRKQNFSSTNSTTTTDNNDK
KSLKNNLFITGDNDDDDEEIQDTTETSFNNNATRNFHDSSPIKGNSTQNTTLNLVEPGDK
SQFLNEETQNPRNKREVKKPISYAESENDDDDDDFETSFSNPRKRKRTIIPHDDDDGEYK
PNSDKHNIDGNSTKLESSDDEDLFMVSQKIPQKKARNTSTAYPKIVNKSVLKAPSPNNKN
KPTLKMKTSASSSSSSSNNNYKTLSNGTSATTEKAGYKGTTDTRYSWLTKSPRLDANKNS
PDSPDFDPRTVFIPQTAWNKFTPFEEQYWKIKMNLMDCIVFFKKGKFYELYENDALLANQ
LFDLKIAGNGGRAGMVLAGIPEMSFDYWANQFIQHGYKVAKVDQAETLLAKEMREASLKS
SSSSNKRSIVQRELKCVLTRGTLTEEGMLQSDLPTYCLSVKEDKDTDGNTTFGVSFVDTS
TGEIYITQLNHDNDYSKLDTVLSQIRPHELVLERNNLSAAALKLIKFNSSPGAIYNYSKA
NTEFYDVQNTCENLRTKYDSIPTILSQYMEDSDKWVALNSFGGLLNYLQFLKLDKDLISM
NKIMEYETFQKQGAANMVLDGITLQNLEIFANSFDGSDNGTFFKLVNRANTPMGKRLMRK
WVMLPLFNKTDIENRLDSVDQLLQEIELRELVESVFSNIPDLERLVARVHSGSLKFKDFD
GKVLPGFEKIVNFVDKLKNNFKLCGAFREYANRMPIELLKEQMEIWKKSYDKSKIINPAG
ETTIVLYPGVDKEFDDSVSKINTLHQELQEQLKKYKKMLGCNKIQFKDSGKELYTIEVPI
QYTKKVPHNWTQLAANKSFKKYYSPEVERMARQMAEFKESHRMLEADLIGKLYQRFDQYM
SKLWTPVIELIASMDCLLSLAKTSESIGIPCCRPKFLSDQKTGSMVNFKGLRHPFFNMGA
STCKEFIPNDIKLGGENNNKLVLLTGANAAGKSTVLRMTCIAAIMSQIGCYVPCEEAELI
PIDRIMTRLGANDNIMQGKSTFLVELSETKKILDMATNKSLLVIDELGRGGSSTDGFAIA
ESVLYHLATHIQSLGFFATHYGGLNFSFRSHPQVRSMKMSILCDENNKNVTFLYKLVDGC
SEGSFGMHVANMCGIPREIVDNAINAADNFEQTSQLLKFLKNSSVHTDKGCDDNSLIPLG
VESDFVRILKYGINNTEKGCGDGVKIYDDDVKRGALANIFKMIDELK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgacaccatcatacttaaaacatattaagcaaaccccaccttcaagcaaaaaaaaattg
aagcaatcaacattactggggtttttttcctcaagtaaaaagtcaggctcaagcccaagt
aatagaaaacaaaatttttcttccaccaatagtactacaaccacagataacaatgacaaa
aaatctttgaaaaataatttgttcattactggtgataatgatgatgacgatgaagaaatt
caagataccactgaaacatctttcaataacaatgccactagaaattttcacgatagttcc
ccaattaaagggaattccacgcaaaatacaactttaaatttggtcgaacctggtgataaa
tctcaatttttaaacgaagaaactcaaaaccctaggaataaaagagaagttaagaaacca
atttcttatgcagaaagtgaaaatgatgatgatgatgatgattttgaaactagtttttcc
aatccaagaaagagaaaaagaaccattatcccccatgatgatgatgatggtgaatacaaa
cctaattctgataagcacaacattgatggtaatagtacaaaactagaatcatcagatgac
gaagatctttttatggtttcacaaaaaattccacagaaaaaggcaaggaacacctccact
gcctatcccaaaatagtcaacaaatctgtattaaaagcaccttctccaaacaataaaaat
aaaccaacgcttaaaatgaaaactagtgcttctagcagcagcagcagcagcaataacaac
tacaagactttatccaatggtacttcggcaacgactgaaaaagctggatacaaaggaaca
actgacacaaggtatagttggttaaccaaatcccctagactagacgccaataaaaactct
ccagacagtccagattttgatccaaggacggtattcattccacagaccgcatggaataaa
tttacaccatttgaagaacaatattggaaaatcaaaatgaatttaatggattgtattgtt
ttttttaaaaaggggaaattttatgaattgtacgaaaacgatgcattgttggctaatcaa
ttatttgacttaaaaattgctggtaatggtggtagagcaggaatggttttagctggtatt
cctgaaatgagttttgactattgggctaaccaatttatccaacatggttacaaagtagct
aaagtagatcaagctgaaactttgttggccaaagaaatgagagaagcttcattaaaatca
tctagctcaagtaataaaagaagtattgtccaaagggaattaaaatgcgttttaactaga
ggtacgttaactgaagaaggaatgctacagagtgatttgcccacatattgtctgtctgtt
aaagaagataaagatacagatgggaacactacttttggtgtttcatttgttgatacatcc
actggtgaaatatacattacccaattgaatcatgacaatgattattctaagttagatact
gttttgtcccaaataagaccacatgagttggttcttgagagaaacaatttatccgcggca
gcattgaaactcattaagttcaattcatcaccaggtgcgatttataattattcaaaggcc
aatactgagttttatgatgttcaaaacacgtgtgaaaatttacgtaccaagtatgattcg
attcctacaattttatctcaatatatggaagacagtgataagtgggtggcactaaattcc
tttggcggattattgaactatttacaatttttaaaattggacaaggatctaatttctatg
aataaaataatggaatatgagactttccagaagcaaggcgcagcaaatatggtcttggat
ggcatcactttacaaaacttggagatttttgctaattctttcgatggaagcgataatggt
acttttttcaagctagttaacagagctaatacaccgatgggcaaaagattaatgagaaaa
tgggtgatgttacctctttttaataaaactgacattgagaacaggttggatagcgttgat
cagcttttacaggagattgaattaagagaattggtggaatctgtcttctctaatattcct
gatttggaaagattggttgctagagtccattctgggagcttgaaattcaaagatttcgat
gggaaagtcttgcccggttttgaaaagatcgtcaactttgtagataagctgaaaaataat
tttaaattatgcggtgccttccgtgaatatgcaaatagaatgcccattgagttgttaaag
gagcaaatggaaatatggaagaaatcctatgataaatctaagatcattaatccagctggc
gaaaccacgattgtgttgtaccccggtgtagacaaagagtttgatgattcggtgtcgaaa
attaacactttgcatcaagagttacaagagcaattgaaaaaatacaaaaaaatgttaggt
tgcaataaaattcagtttaaagatagcggcaaagaactatataccattgaagttccaata
cagtatacaaaaaaggtaccgcacaattggacacaattggccgcaaataaatcgttcaaa
aagtattattcgccagaggtagaacgtatggccagacaaatggcagaatttaaagaatca
cacaggatgttagaggctgatttaattggcaaattataccagcgttttgaccaatatatg
agcaagttgtggacaccagtgattgaattaattgcatctatggactgtttattgtcacta
gccaaaacttcggagagtattggtattccatgttgtaggccaaagtttttaagtgaccag
aagacaggcagcatggtaaacttcaaaggtttgaggcatccatttttcaacatgggagca
tctacatgcaaggaatttattcccaacgacattaagctcggtggtgaaaacaataataaa
cttgtactattaactggtgcaaatgcggctggtaaatctactgtgttacgtatgacatgt
atagcggctataatgagtcaaattgggtgttatgttccatgcgaagaggccgagttgatt
ccaattgatcgtatcatgacaagattaggagcaaacgataatattatgcaaggaaagtct
acgtttttggtggaattatcagaaactaaaaagattttggatatggccacgaacaaatct
ttgttagtgatagacgaactaggtcgcggtgggtcaagcactgacgggtttgctattgct
gaaagcgttttataccatttggccacgcacattcaaagtttagggttttttgccacacat
tacggagggttaaattttagttttagatcacatccccaagttagatcgatgaagatgagt
attttatgcgatgaaaataacaaaaatgtcacatttttatacaagttagtagatgggtgt
agtgagggtagttttggtatgcatgttgccaatatgtgtggtataccaagggaaattgtc
gataacgcaattaatgctgcagacaattttgaacaaacttcacaattgttaaaatttttg
aaaaatagtagcgttcatactgataaaggttgtgacgataatagtttaattccattgggg
gtagaaagtgattttgttagaattttgaagtatggtattaataatactgaaaaaggctgt
ggtgatggtgtaaaaatatatgacgacgatgttaaaagaggagcactggccaatattttt
aaaatgattgatgagttgaaatga
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