Saccharomycodes ludwigii: SCDLUD_001884
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Entry
SCDLUD_001884 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03440
Homologous recombination
slud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCDLUD_001884
03460 Fanconi anemia pathway
SCDLUD_001884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slud03032
]
SCDLUD_001884
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_001884
Enzymes [BR:
slud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCDLUD_001884
DNA replication proteins [BR:
slud03032
]
Eukaryotic type
DNA Topoisomerases
SCDLUD_001884
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
SCDLUD_001884
FA (Fanconi anemia) pathway
SCDLUD_001884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
70107201
NCBI-ProteinID:
XP_045936001
LinkDB
All DBs
Position
II:complement(1502169..1504124)
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AA seq
651 aa
AA seq
DB search
MKVVCVAEKNSIAKQVATILSGGNFHTRNSLDKYIKNYDFRCNQFPFTSANSNFYVEVTM
TSVKGHISSLGFEGSEDRGGPYSWGNCDPIELYSAPVINSFNFRNVIQSIYKECRDADYL
MIWTDCDREGEYIGWEIYMAANYGTNNWNIRMNTTTTAGQPKFNESNTFRAIFSHLERSH
IINATRNPKKLDQKSIDAVSARMEIDLRAGLSFTRFLTNFFQNNKLVDAKVVVSYGPCQF
PTLGFVVDRDDRIEKFVPENFWYLEISIKRDNTDGGQIKLQWKRGHLFDRLIVYTIYEHC
VETGGATAKVTNIVSKPTSKYRPLPLTTVELQKNCAKFFKMSAKRSLDAAEYLYQKGFLS
YPRTETDIFPQTMDLKALVEQQKNDVRFRNYASNLLSEDYETSTGNKFSWPRQGSHDDKA
HPPIHPIASCSTENLTADQKTVYEYVTRHFLACCSQDAKGHQTSIEVQWATEFFKTTGIT
VLARNFLEIYPYISWKSTAELPELHMGDTVDLLDTDMKSGSTSAPQPMTESELILLMDAN
GIGTDATIADHIEKIKGREYIRPEKSGKQTYLRSTKLGKALVHGFEEIGLEDSFAKPFLR
REMENDLKLICSGNKFKRAVVQDMVERYLNYYNITQINKRTLLSVFNRFNG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttgtgtagctgagaaaaattctatagcaaagcaagttgctacaatatta
agtggcgggaattttcatacaagaaattcactggataaatacattaaaaattatgatttc
agatgcaaccagtttccctttacaagtgccaacagcaatttctatgtagaagttacaatg
actagtgttaagggccatattagcagtctgggctttgaaggcagtgaagacagaggtggt
ccatattcttggggtaattgtgatccaattgaattgtattctgcaccagttataaatagt
tttaattttaggaatgttattcaaagtatttacaaagaatgtagggatgctgactattta
atgatttggaccgattgtgatagagaaggtgagtatattggatgggagatctatatggca
gcaaactatggaaccaataattggaatataagaatgaatactacaactactgcaggacaa
ccaaaatttaatgaaagcaatacatttagagccattttttcacatttagagaggtctcat
attataaacgccactaggaaccctaaaaaattagatcaaaaatccatagatgctgtaagt
gctaggatggaaattgatttaagggcaggcttgagtttcacaagatttttaacaaacttt
tttcaaaataataaattggtagacgctaaagttgttgtgtcgtacggtccttgccaattc
cctacgttgggatttgtagtagatcgagatgataggatagaaaaatttgttccagaaaat
ttttggtatttagaaatatctataaaaagggataacactgatggtggtcaaattaaactc
caatggaaaaggggccatttatttgatagactaattgtatataccatatacgagcattgt
gtagaaacaggtggagctacggccaaagtaaccaatattgtatctaagccaacctctaaa
tatagacctttaccattaactacagtagagttacaaaaaaattgtgcaaaatttttcaaa
atgagcgctaaaagatcattagatgctgcagaatacctctatcaaaaggggtttttgtct
tatcctagaacagaaacagatattttccctcaaactatggacttaaaagcactagttgaa
caacaaaaaaatgatgtgaggtttagaaattatgcttctaaccttttgtcagaggattat
gaaacttccactggaaataagttttcttggcctagacaaggttcacatgatgataaggcg
catccgcccattcatcccattgccagttgtagcacggagaatttaacggctgatcaaaaa
acggtttatgaatatgtaacaagacacttcttagcatgctgttctcaagatgccaagggt
catcagacttccattgaagttcaatgggccactgaattttttaagacaactgggataact
gttctagctagaaactttttagaaatatacccgtatatcagttggaaaagtaccgcggaa
ttaccagaattacatatgggtgataccgttgatttattagatacagatatgaaatctgga
tccacatctgcgcctcaaccaatgacagagagtgagctaattttattaatggatgcaaat
ggaattggtactgatgccactattgcggatcatattgaaaaaattaaggggcgggaatat
attagacctgaaaagtctggtaaacaaacctatctaaggtccaccaaattagggaaagct
ttagttcatggttttgaagagataggattggaggattcctttgctaaaccatttttacga
agagaaatggagaatgatttgaaactaatatgttccggtaataagtttaaaagagctgtt
gttcaggatatggtagagcggtatttaaattactataatataacacagataaataaaaga
acgttattgagtgtatttaacagattcaatggttga
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