Saccharomycodes ludwigii: SCDLUD_002014
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Entry
SCDLUD_002014 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCDLUD_002014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_002014
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_002014
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SCDLUD_002014
Coactivators
SAGA/TFTC/STAGA complex
SCDLUD_002014
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
SCDLUD_002014
STAGA complex
SCDLUD_002014
TFTC complex
SCDLUD_002014
SAGA complex
SCDLUD_002014
SLIK complex
SCDLUD_002014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
LisH
PROPPIN
Nup160
Ge1_WD40
RMC1_N
WDR54
Motif
Other DBs
NCBI-GeneID:
70107331
NCBI-ProteinID:
XP_045936127
LinkDB
All DBs
Position
II:1814302..1817049
Genome browser
AA seq
915 aa
AA seq
DB search
MSNPRPNRNINPNLAPNRRQAPGGTPASISTSGSSDALSGSSQHLASQQTQQQNSQPQPQ
QQQQQQQQQRRQGGGTGFSSADLNRIVLEYLSKKGYHRTEQMLRAESSRTLTPLNKAQPG
TTSNNQLPNIPGDRNVDLPVSNPPNILPNTRINNNNNNSNNNNNNNNNNNNNNNNKNNNN
NNNNKNNNNDNNNADKNTGMKRDINGHMINKIRPVTADDYIRAYSLLKKWVDSSLEIYKT
QLERILYPIFVYTFLYLIKKDYPLHARKFFDRYSTDHRIYHGNDINKLFSVNSLDHLKEN
ELAVTFLDNKYKISVTRTVFNLLLFFLTENEAVGTSLLISIVNDHLDPNIVESITSKNDI
TGGIVISTVSEDVNAFNKQQVKLGNLPLDEVFAKEVEYELNKKDEQEKEESEKLGREPPS
RTLVDEFKQMNGSAQQSNGQGKETDDNNNNNSSNPVEYEATDSNVRAEISKEGNTNINIA
NTAPTGGALSVFDKKRSSLPPMAKSQEDWKKEEQEQQKNLTISVMEQKKKLDSPDRNALP
LPPKTALDIKLEIQKVYESRDSIKLNRFQVTSPSVVMYTFHNTNGEMTCLNFSDDSTMAA
TGFQDSIIKVWSLDGQPLKSKMENDDLNSKFMECRTLIGHSGPVYSVSFSPDNRFLLSCS
EDKTVRLWSLDTFTCLVSYKGHNHPVWDIEFSPMGHYFVSASHDQTARLWSCDHIYPLRI
FAGHASDVDCVTFHPNGCYIFTGSSDRTCRMWDVVTGNCVRLFLGHNSPVTALSVAPDGR
WLASASDDGLINLWDIGSGKRLKTMRGHGRRSIYSLSFSKECTVLVSAGGDGSVRVWDLK
KATSEPNVEPEEVFAQYYENLHHSIQYDAKIYGKKRVVIPTIDLISSFFTKQTPVYKVRF
TRSNLVFAGGAFVDK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccaaggccaaatagaaatataaatccaaatcttgcacccaataggagacaa
gcgccaggaggaacacccgcttcaatatccacttcaggatcttcagatgcattgtctggt
tcttcgcagcatctagcatcacaacaaacacaacaacaaaattcgcaaccacaacctcaa
cagcagcagcagcaacaacaacaacaacgtagacaaggtggagggactggattttcttct
gctgatttaaatcgtattgttttagagtatttaagtaagaaaggatatcataggaccgaa
caaatgttaagagcagaaagtagtcgcacattaacacctttgaacaaagcgcaaccgggc
acaacgtcaaataatcagttaccaaatataccaggcgatagaaatgtagatttgccggta
agcaatccaccaaatatactgcctaatactcgaattaataataataataataatagtaat
aataataacaataataacaataataacaataataacaataataacaagaataataataat
aataataataacaagaataataataacgacaacaacaatgccgataaaaacacaggtatg
aaaagagatatcaatggtcacatgatcaataagattaggccagtcacagctgatgactac
atacgtgcttattcgttattaaaaaaatgggttgactcatcattagaaatttacaagact
caattagaaagaatattgtacccaattttcgtttacacatttttatatttgattaaaaag
gactatccattacatgcaaggaaattttttgatagatatagtactgatcacaggatttat
catggtaatgatattaataaattgtttagcgtgaattctttagaccatttgaaggaaaat
gaattagctgtaacttttttagataacaaatataaaatctcagttacaaggactgttttc
aatttattattgtttttcttaactgagaatgaagcagttggcacttcattgttaattagc
attgttaatgatcatttagatcctaatattgttgaaagtatcacttctaagaatgatatc
acaggcggtattgtaatatccaccgtaagtgaagatgtcaatgcgtttaataagcaacaa
gttaagttaggtaacttaccattggatgaagtatttgctaaggaggttgagtacgagtta
aataaaaaagatgagcaagaaaaggaagaatctgagaagcttggcagggaaccaccatct
cgtaccttagttgatgaatttaaacaaatgaatggatcagcacaacaaagtaacgggcag
ggcaaggaaacagatgataataataataacaacagcagtaatccggttgagtatgaagca
accgatagcaatgttcgtgcagaaatatctaaagaaggtaatacgaatatcaacatcgct
aatacggcccctactggtggtgcactatcggtctttgataaaaagagatcatctctacct
ccgatggctaaatcacaggaagactggaagaaggaagaacaagaacaacaaaaaaacttg
acaataagtgttatggagcaaaaaaaaaaattagattcgccagatagaaatgcgttacct
ctaccacctaaaacagccttagatattaaattggaaattcagaaagtttatgaatcgaga
gactccattaaattaaatcgatttcaagtaacttcgccaagtgtcgtaatgtacactttc
cataataccaacggtgagatgacatgtttgaattttagtgatgattctacaatggcagcc
acagggtttcaagatagtatcattaaggtttggagtttagatggacagcctttgaaaagt
aaaatggaaaacgatgatcttaactctaagtttatggaatgtagaacactaataggccat
agtggacctgtttattctgtaagctttagtccggacaacagatttttattaagctgcagc
gaagataaaacagtgagattatggtcgttggatacattcacatgtttagttagttataag
ggtcataatcatcctgtctgggatatcgaattttctccgatgggacattattttgtttca
gcctcacatgaccaaactgcaaggttatggtcttgtgatcacatatatcctttgagaatt
ttcgcaggccatgcaagtgatgtagattgtgttacttttcatcccaacggttgttacatt
ttcaccggatcaagtgatagaacttgtagaatgtgggatgttgttacggggaactgtgtt
aggttatttttgggtcataattctcctgttacagcattaagtgttgcaccagacggtaga
tggttagcttcagctagtgatgatggtttgattaacttgtgggacattggttccggtaag
agattgaaaactatgagaggtcatggtagaagaagtatatattcactttcctttagcaag
gagtgtacagttttggtgagtgctggcggtgatggaagtgttagagtctgggatttaaaa
aaggctacaagcgaacctaatgtggaaccagaagaagtttttgctcaatattatgaaaat
ttacatcattcgatccagtatgatgctaagatctatggtaagaaaagagttgtcatcccc
actatagatttgatttcttcattttttaccaaacaaacaccggtttataaagttaggttc
accagaagtaatttagtatttgccggtggcgcattcgttgataaataa
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