KEGG   Saccharomycodes ludwigii: SCDLUD_002014
Entry
SCDLUD_002014     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SCDLUD_002014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slud03021]
    SCDLUD_002014
   03036 Chromosome and associated proteins [BR:slud03036]
    SCDLUD_002014
Transcription machinery [BR:slud03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     SCDLUD_002014
   Coactivators
    SAGA/TFTC/STAGA complex
     SCDLUD_002014
Chromosome and associated proteins [BR:slud03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     SCDLUD_002014
    STAGA complex
     SCDLUD_002014
    TFTC complex
     SCDLUD_002014
    SAGA complex
     SCDLUD_002014
    SLIK complex
     SCDLUD_002014
SSDB
Motif
Pfam: WD40_Prp19 WD40 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_RFWD3 LisH Beta-prop_SPT8 PROPPIN Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_VPS8 RMC1_N WDR54 VPS8_N LisH_TPL
Other DBs
NCBI-GeneID: 70107331
NCBI-ProteinID: XP_045936127
LinkDB
Position
II:1814302..1817049
AA seq 915 aa
MSNPRPNRNINPNLAPNRRQAPGGTPASISTSGSSDALSGSSQHLASQQTQQQNSQPQPQ
QQQQQQQQQRRQGGGTGFSSADLNRIVLEYLSKKGYHRTEQMLRAESSRTLTPLNKAQPG
TTSNNQLPNIPGDRNVDLPVSNPPNILPNTRINNNNNNSNNNNNNNNNNNNNNNNKNNNN
NNNNKNNNNDNNNADKNTGMKRDINGHMINKIRPVTADDYIRAYSLLKKWVDSSLEIYKT
QLERILYPIFVYTFLYLIKKDYPLHARKFFDRYSTDHRIYHGNDINKLFSVNSLDHLKEN
ELAVTFLDNKYKISVTRTVFNLLLFFLTENEAVGTSLLISIVNDHLDPNIVESITSKNDI
TGGIVISTVSEDVNAFNKQQVKLGNLPLDEVFAKEVEYELNKKDEQEKEESEKLGREPPS
RTLVDEFKQMNGSAQQSNGQGKETDDNNNNNSSNPVEYEATDSNVRAEISKEGNTNINIA
NTAPTGGALSVFDKKRSSLPPMAKSQEDWKKEEQEQQKNLTISVMEQKKKLDSPDRNALP
LPPKTALDIKLEIQKVYESRDSIKLNRFQVTSPSVVMYTFHNTNGEMTCLNFSDDSTMAA
TGFQDSIIKVWSLDGQPLKSKMENDDLNSKFMECRTLIGHSGPVYSVSFSPDNRFLLSCS
EDKTVRLWSLDTFTCLVSYKGHNHPVWDIEFSPMGHYFVSASHDQTARLWSCDHIYPLRI
FAGHASDVDCVTFHPNGCYIFTGSSDRTCRMWDVVTGNCVRLFLGHNSPVTALSVAPDGR
WLASASDDGLINLWDIGSGKRLKTMRGHGRRSIYSLSFSKECTVLVSAGGDGSVRVWDLK
KATSEPNVEPEEVFAQYYENLHHSIQYDAKIYGKKRVVIPTIDLISSFFTKQTPVYKVRF
TRSNLVFAGGAFVDK
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgtccaatccaaggccaaatagaaatataaatccaaatcttgcacccaataggagacaa
gcgccaggaggaacacccgcttcaatatccacttcaggatcttcagatgcattgtctggt
tcttcgcagcatctagcatcacaacaaacacaacaacaaaattcgcaaccacaacctcaa
cagcagcagcagcaacaacaacaacaacgtagacaaggtggagggactggattttcttct
gctgatttaaatcgtattgttttagagtatttaagtaagaaaggatatcataggaccgaa
caaatgttaagagcagaaagtagtcgcacattaacacctttgaacaaagcgcaaccgggc
acaacgtcaaataatcagttaccaaatataccaggcgatagaaatgtagatttgccggta
agcaatccaccaaatatactgcctaatactcgaattaataataataataataatagtaat
aataataacaataataacaataataacaataataacaataataacaagaataataataat
aataataataacaagaataataataacgacaacaacaatgccgataaaaacacaggtatg
aaaagagatatcaatggtcacatgatcaataagattaggccagtcacagctgatgactac
atacgtgcttattcgttattaaaaaaatgggttgactcatcattagaaatttacaagact
caattagaaagaatattgtacccaattttcgtttacacatttttatatttgattaaaaag
gactatccattacatgcaaggaaattttttgatagatatagtactgatcacaggatttat
catggtaatgatattaataaattgtttagcgtgaattctttagaccatttgaaggaaaat
gaattagctgtaacttttttagataacaaatataaaatctcagttacaaggactgttttc
aatttattattgtttttcttaactgagaatgaagcagttggcacttcattgttaattagc
attgttaatgatcatttagatcctaatattgttgaaagtatcacttctaagaatgatatc
acaggcggtattgtaatatccaccgtaagtgaagatgtcaatgcgtttaataagcaacaa
gttaagttaggtaacttaccattggatgaagtatttgctaaggaggttgagtacgagtta
aataaaaaagatgagcaagaaaaggaagaatctgagaagcttggcagggaaccaccatct
cgtaccttagttgatgaatttaaacaaatgaatggatcagcacaacaaagtaacgggcag
ggcaaggaaacagatgataataataataacaacagcagtaatccggttgagtatgaagca
accgatagcaatgttcgtgcagaaatatctaaagaaggtaatacgaatatcaacatcgct
aatacggcccctactggtggtgcactatcggtctttgataaaaagagatcatctctacct
ccgatggctaaatcacaggaagactggaagaaggaagaacaagaacaacaaaaaaacttg
acaataagtgttatggagcaaaaaaaaaaattagattcgccagatagaaatgcgttacct
ctaccacctaaaacagccttagatattaaattggaaattcagaaagtttatgaatcgaga
gactccattaaattaaatcgatttcaagtaacttcgccaagtgtcgtaatgtacactttc
cataataccaacggtgagatgacatgtttgaattttagtgatgattctacaatggcagcc
acagggtttcaagatagtatcattaaggtttggagtttagatggacagcctttgaaaagt
aaaatggaaaacgatgatcttaactctaagtttatggaatgtagaacactaataggccat
agtggacctgtttattctgtaagctttagtccggacaacagatttttattaagctgcagc
gaagataaaacagtgagattatggtcgttggatacattcacatgtttagttagttataag
ggtcataatcatcctgtctgggatatcgaattttctccgatgggacattattttgtttca
gcctcacatgaccaaactgcaaggttatggtcttgtgatcacatatatcctttgagaatt
ttcgcaggccatgcaagtgatgtagattgtgttacttttcatcccaacggttgttacatt
ttcaccggatcaagtgatagaacttgtagaatgtgggatgttgttacggggaactgtgtt
aggttatttttgggtcataattctcctgttacagcattaagtgttgcaccagacggtaga
tggttagcttcagctagtgatgatggtttgattaacttgtgggacattggttccggtaag
agattgaaaactatgagaggtcatggtagaagaagtatatattcactttcctttagcaag
gagtgtacagttttggtgagtgctggcggtgatggaagtgttagagtctgggatttaaaa
aaggctacaagcgaacctaatgtggaaccagaagaagtttttgctcaatattatgaaaat
ttacatcattcgatccagtatgatgctaagatctatggtaagaaaagagttgtcatcccc
actatagatttgatttcttcattttttaccaaacaaacaccggtttataaagttaggttc
accagaagtaatttagtatttgccggtggcgcattcgttgataaataa

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