KEGG   Saccharomycodes ludwigii: SCDLUD_002018
Entry
SCDLUD_002018     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03082  ATP-dependent chromatin remodeling
slud03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SCDLUD_002018
   03083 Polycomb repressive complex
    SCDLUD_002018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:slud03036]
    SCDLUD_002018
Chromosome and associated proteins [BR:slud03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SCDLUD_002018
  Histone modification proteins
   HAT complexes
    HATB complex
     SCDLUD_002018
   HDAC complexes
    Sin3A-HDAC complex
     SCDLUD_002018
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SCDLUD_002018
    PRC2.2
     SCDLUD_002018
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SCDLUD_002018
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SCDLUD_002018
  Chromatin remodeling factors
   NuRD complex
    SCDLUD_002018
   NuRF complex
    SCDLUD_002018
   NuRF complex (fruit fly)
    SCDLUD_002018
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 MIOS_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR11_1st Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 70107335
NCBI-ProteinID: XP_045936131
LinkDB
Position
II:1822859..1824310
AA seq 483 aa
MMTSILLDDENDKASIDNITNINSVHETRDSIVTLNEKNKKENHTEQNNEPENGGEHTSL
TIPEDLQRKYINWKKNAKILYDYLNSNTSKWPSLTCEIFPDVEIATEKRRILLSSFTSSQ
LPLNESIYISSISTDIPKSSLNQFDMDEMEFKIDNDVKQGNKKLAKQIEIGFPIGEECNR
ARYMPLNPDIIGCASSSGNLYIYNRTKHGSLPRTRNGMSDGNNIAVQNEISRDFYEVVYK
DEDRHSEAYSLAWNYQRNGIVATCHADGTVNIWNLSKTYKKSNSKIITTKEHDFFPDIEK
GCNDVSWMVHHESILAVGCESNNKISIIDTRTNHTPYIKATDPLSNNTASASGINSVQFN
YQNDLLLCSGNSNSRVGVWDLRNMGKPVNSWNHGNTGNSGSISSVAWNPNISNVLASAGL
NDGLVKIWDASDIEDPLLFTHGGHMLGVNDISWDLHDSWLMCSVSNDNSIQIWKPSMKQL
MNS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgatgacatctattttattggatgacgaaaatgacaaagcttctattgataatataact
aatattaatagtgttcacgaaacacgggactcaatagtaacgctaaacgaaaaaaacaag
aaagaaaaccatacagaacagaacaatgaaccagaaaacggaggagaacatacctcttta
acaattccagaagatttacaacgtaaatatattaattggaagaaaaatgctaaaatttta
tatgattatttaaacagcaacacatcaaaatggccttcgttaacctgtgaaatattccca
gatgtagaaattgctacagaaaaaagaagaatacttctatcttcatttacatcgtcccaa
ttaccattaaatgaatctatatatattagttcgatttccaccgatatcccaaagagttct
ttaaatcaatttgatatggatgaaatggaatttaagatagataatgacgtaaagcaagga
aacaagaagttggcaaagcaaatagaaattggatttcctattggtgaagaatgtaataga
gccaggtatatgccactaaatcctgatattattggatgtgcatcttcgagtggcaattta
tatatttataatagaaccaagcacggctcattaccaagaaccaggaatggcatgtctgat
ggtaacaatatagcagtccaaaacgaaatttcaagagatttctatgaagtggtttataaa
gatgaagatcgccatagtgaagcgtattctctggcttggaactaccagagaaatgggata
gtggcgacctgtcacgctgatggaacagttaatatctggaatttatccaaaacttataaa
aagtcaaatagcaaaattataaccacaaaagaacatgattttttcccagatattgaaaag
ggatgtaatgatgtttcatggatggttcatcatgaatctatattagctgttggttgtgag
agtaataataaaattagtataatagatacaagaacaaatcacacgccatatatcaaggcc
acagatccattgtccaataatactgcctcggcatccggaataaatagtgtacagttcaat
tatcaaaatgacttactgttatgttcgggcaatagcaatagtagagtaggtgtttgggac
ttgagaaatatgggtaaaccagttaatagttggaatcatggaaacacaggtaatagtggg
agtatttctagtgttgcatggaatcctaatatttctaatgttctagcatcagctggtcta
aatgatggtctagtcaagatatgggatgcttcggacatagaagacccactacttttcacc
catggtggtcacatgctgggtgttaatgatatttcttgggacttacacgactcgtggtta
atgtgtagtgtttctaatgacaattctattcaaatatggaaaccatctatgaaacaatta
atgaattcttaa

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