Saccharomycodes ludwigii: SCDLUD_002034
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Entry
SCDLUD_002034 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_002034
Enzymes [BR:
slud01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
SCDLUD_002034
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SCDLUD_002034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
70107351
NCBI-ProteinID:
XP_045936146
LinkDB
All DBs
Position
II:1866468..1868150
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AA seq
560 aa
AA seq
DB search
MGRRGKGPKTNNSHKLLPEKERFIQCCSDITLELTSSLTKEQQQEKDINLNGLIQRYSKK
YKLKQQPRLTDIINSIPDQYKKYLLPKLKAKPVRTASGIAVVAVMCKPHRCPHIAYTGNI
CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRIEQLKQLGHNIDKVEYI
IMGGTFMSLPKSYREDFVVNLHNALSGFNGTNLEEAIQYSQESVTKCVGITIETRPDYCT
QTHLNDLLEYGCTRLEIGVQSLYEDVARDTNRGHTVKSVCETFAVAKDAGYKVVSHMMPD
LPNVGMERDMEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKNGMYKSYNANALIDL
VARIMALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARMKDFGTSCRDVRTREVGI
QEVHHKIAPDQIELVRRDYYANGGWETFLSYEDPQKDILIGLLRLRKASKKYTYRKEFTQ
CRTSIVRELHVYGSVVPVHNRDPRKFQHQGFGTLLMEEAERIAREEHGSSKISVISGVGV
RNYYAKLGYTLDGPYMSKII
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccgcggtaaaggtccaaaaaccaataattcacataaattgttacctgaaaaa
gagagatttattcaatgctgttccgatatcacattagaattaaccagctcattaaccaaa
gagcaacaacaggaaaaagatattaatttaaacggtttaatccaaagatattctaaaaaa
tataaactaaaacagcaaccaagattaacagatattataaattctattccagaccaatat
aaaaaatatttattacccaaattaaaagccaaaccagttcgtactgcaagtggtattgcc
gtggttgcagtcatgtgcaaaccacacagatgtccacatattgcttacacggggaacatt
tgtgtttattgccctggtggaccagattctgattttgaatattcaactcaaagttatacg
ggttatgagccaacttcaatgcgtgccattagagctcgttatgatccatatgaacaggct
cgtggcagaatagaacaattgaaacaattgggtcacaatattgataaagtagaatatatc
attatgggcggtacttttatgtcattaccaaaatcttatcgtgaagattttgttgttaat
ttacataatgccttgagtggttttaatggcactaatttggaggaagctattcagtattcc
caagaaagtgtcaccaagtgtgttggtattaccatagaaacaagaccagactattgtaca
caaacacatttgaatgatttattagagtatggatgtactagattggaaattggggtccag
tcattatatgaagatgttgcaagagataccaatagaggacatacagttaaatcagtgtgt
gaaacttttgctgttgctaaagatgcgggctataaagttgtcagtcatatgatgcccgat
ttaccaaatgttggaatggaaagggatatggaacaatttaaagaatattttgagaatcca
gatttcagaacagatggtttaaaaatttatcctactttagttatcagaggtactggtcta
tatgagttatggaaaaacggtatgtacaagagttataatgccaatgctttgattgactta
gttgctcgtattatggctttagttccaccatggacaagaatttatcgtgttcaaagggat
attccaatgcccttagttacaagtggtgtagataacgggaacttaagagaattagctcta
gctcgaatgaaagattttggaacttcttgtagagatgttaggactagagaagttggcatt
caagaagttcatcacaaaatcgcacctgatcaaatagaattagttagaagagattactat
gctaatggtggatgggaaactttcttgtcttacgaggacccacaaaaggacatcctaatc
ggactattgagattgagaaaggcatccaaaaaatatacatatagaaaagagttcactcaa
tgtaggacttccatagttagagaattacacgtgtatggttctgttgttccagttcataac
agagatccacgtaaattccagcatcaagggttcggtacattattaatggaagaagctgaa
agaattgcccgtgaggaacatggtagttctaaaatatctgttatttcaggtgttggagtt
aggaactattatgcaaaactaggctataccttggatggtccatacatgtctaaaataata
taa
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