KEGG   Saccharomycodes ludwigii: SCDLUD_002086
Entry
SCDLUD_002086     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03020  RNA polymerase
slud03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCDLUD_002086
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCDLUD_002086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slud03021]
    SCDLUD_002086
   03400 DNA repair and recombination proteins [BR:slud03400]
    SCDLUD_002086
Transcription machinery [BR:slud03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SCDLUD_002086
  RNA polymerase III system
   RNA polymerase III
     SCDLUD_002086
  RNA polymerase I system
   RNA polymerase I
     SCDLUD_002086
DNA repair and recombination proteins [BR:slud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SCDLUD_002086
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 70107403
NCBI-ProteinID: XP_045936197
LinkDB
Position
II:1981260..1981694
AA seq 144 aa
MSILFDGIFQVEDVDPGRYRNISRIEATSSDCKLTLDINTELFPVKKNATLTIALASSLE
TENNSTNNFSSNTNSWRPPLPGTKSLADDYDYVMHGTAYKFDEINNSDNIAVYYSFGGLL
LRLEGNYRNLNNLKQENTYILIRR
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtctatattatttgatggtatatttcaagttgaggatgttgatccaggtagatacaga
aatatttctagaatcgaggccacttcgtcagattgtaaattgactttagatatcaacaca
gaattattcccagtaaagaaaaatgctacattaactattgctctagcatcttctttggaa
actgaaaataatagcaccaataatttttcttcaaataccaatagttggagaccacctcta
cctggtaccaaaagcttagccgatgactacgactatgttatgcacggcaccgcttataaa
tttgatgaaattaataacagcgataacattgctgtttattactcttttggtggactattg
ttgagattggaaggtaattatcgtaacttgaacaatttgaagcaagaaaatacctatatt
ttaattcgtcgttaa

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