Saccharomycodes ludwigii: SCDLUD_002617
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Entry
SCDLUD_002617 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_002617
03012 Translation factors [BR:
slud03012
]
SCDLUD_002617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slud04147
]
SCDLUD_002617
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SCDLUD_002617
mRNA cycle factors
Stress granule specific factors
SCDLUD_002617
Translation factors [BR:
slud03012
]
Eukaryotic type
Initiation factors
eIF-4
SCDLUD_002617
Exosome [BR:
slud04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCDLUD_002617
Exosomal proteins of bladder cancer cells
SCDLUD_002617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
70107934
NCBI-ProteinID:
XP_045935068
LinkDB
All DBs
Position
III:complement(820687..821901)
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AA seq
404 aa
AA seq
DB search
MSADGITEVDANQIETNYDKVVYKFDDMNLKSELLRGIYALGFTDPSAIQQRAILPISEG
HDVLAQAQSGTGKTATFSIGCLQRIDPDVKAPQALILAPTRELALQIEKVVSALASNMTG
VKVHPCIGGTSHQEVVEGFESGAQVIVGTPGRVFDMISRRHLKTDSMKMFILDEADEMLS
SGFKDQIYQIFTFLPSEAQVVLLSATMPMDVLEVTTKFMRNPIRILVKKDELTLEGIKQF
FVNVEEEEYKYDCLSDLYDSISVTQAVIFCNTRRKVEELAARLTADDFTVSAIYSDLPQQ
QRDVIMQEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRK
GIAINFITNKDVAALTELERFYSTQIEEMPANIAELFASTKAEA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgatggtattactgaagttgatgctaaccaaattgaaaccaactatgacaaa
gttgtctacaaatttgatgatatgaacctaaagagcgagttgttgagaggtatctacgct
ttaggtttcaccgatccatctgctattcaacaacgtgccattttgccaatttctgaaggt
cacgatgttttagcacaagcccaatctggtactggtaaaaccgccaccttttctattggt
tgtttgcaaagaattgatcctgacgttaaagctccacaagctttgattttggctccaacc
agagaattagctttgcaaattgaaaaagttgtttctgctttagctagtaacatgactggt
gtcaaggttcacccatgtattggtggtaccagtcaccaagaggttgttgaaggttttgaa
agtggtgcccaagttattgttggtaccccaggtcgtgtttttgatatgattagtagaaga
cacttgaaaaccgatagtatgaagatgtttatcttggatgaagccgatgaaatgttgtct
tctggttttaaagatcaaatctaccaaattttcacctttttgccatcagaagctcaagtc
gtcttgttatctgccactatgccaatggatgttttggaggttaccaccaagtttatgaga
aacccaattagaatcttggttaaaaaggatgaattgaccttggaaggtatcaaacaattt
ttcgtcaacgttgaagaagaagaatacaaatacgattgtttatctgatttgtacgattcc
atttccgttactcaagctgttattttctgtaacaccagaagaaaggttgaagaattagcc
gccagattaactgctgatgatttcactgtttctgctatctactctgatttaccacaacaa
caaagagatgttattatgcaagaattcagaactggttcttctagaattttgatctccacc
gatttgttggccagaggtattgatgttcaacaagtttctttagtcattaattatgacttg
ccaaataacaaggaaaactacattcacagaattggtagaggtggtcgttttggtagaaag
ggtattgctatcaactttatcaccaataaagatgttgccgctttgacagaattggaaaga
ttttattctactcaaattgaagaaatgccagccaacattgctgaattatttgcttctacc
aaggccgaagcctaa
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