Saccharomycodes ludwigii: SCDLUD_002656
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Entry
SCDLUD_002656 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03030
DNA replication
slud03410
Base excision repair
slud03420
Nucleotide excision repair
slud03430
Mismatch repair
slud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCDLUD_002656
03410 Base excision repair
SCDLUD_002656
03420 Nucleotide excision repair
SCDLUD_002656
03430 Mismatch repair
SCDLUD_002656
03440 Homologous recombination
SCDLUD_002656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slud03032
]
SCDLUD_002656
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_002656
Enzymes [BR:
slud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCDLUD_002656
DNA replication proteins [BR:
slud03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
SCDLUD_002656
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
SCDLUD_002656
MMR (mismatch excision repair)
DNA polymerase delta complex
SCDLUD_002656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
DNA_pol_B_2
RNase_H_2
zf-Tbcl_FmdE
DNA_pol_B_exo2
Tau95
DUF4376
Motif
Other DBs
NCBI-GeneID:
70107973
NCBI-ProteinID:
XP_045935106
LinkDB
All DBs
Position
III:932595..935906
Genome browser
AA seq
1103 aa
AA seq
DB search
MSKRSANEVSQEIANDVIEFGVNEESSSTFSNTKKLKSFDHSTLSEPISSMNIIPTDNFA
TRKTSGYQPKNSSSSSKTTANVPSSFEQELQNMKKQSNQRQVWTRSQLPQDFNAENYDIS
FQQLDAEQANLPGQNDDGTSYVVRLFGVTDSGHSILCNVTGFKHYLYVPAPINFSESDIP
SFVEYLQKTFDREGGVHSIEFVYKYSIWGYNGAQKLPFLKIYTPIPSTVNKLRTAFERGN
ISFNDDWFGSGTTTYDNIAYPLRLMIDCGIVGMSWITLNREHYTLIPENERVSNCQIEVK
VNYKDLIAHPSDGEWSKSAPLRILSFDIECAGRVGVFPEPAIDPVIQIANAVSITGESKP
FIRNVFTVNTCLPITGSEIYDYEKEEDMLMHWKKFLVKVDPDVVIGYNTTNFDLPYLVQR
AESLGLNEFPFFGRLTNVRQEIKETVFSSKAYGTRESKTINIDGRLQFDLLQFIQREYQL
RSYTLNSVSAHFLGEQKEDVHHSIITTLYHGDSETRRRLAVYCLKDAYLPLRLLERLMGL
VNYTEMARVTGVPFSYLLTRGQQIKVISQLFRKCLTIDTVIPNISSQGSDEQYEGATVIE
PKRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKQTVERLHLVKDEDYIITPNGDYFV
TTKLKKGILPEILEELLGARKRAKKDMKNETDPFKKNVLNGRQLALKISANSVYGFTGAT
VGKLPCLAISSSVTSFGREMILKTKNAVQEKYSIKNGHEHDAVVVYGDTDSVMVKFGTAD
LKESMRLGTAAAAYVSSLFKHPINLEFEKCYYPYLLINKKRYAGLYWTNPEKYDKLDQKG
LASVRRDSCPLVSVVMNKVLKMILINKDVDGALVYINSIINGILQNEIDTAQLIISKKLA
PNYKNPQPHAVLADRIKQREGVGPNVGDRVDYVIMAGNDKLFNRAEDPLYVLENNIPIDS
KYYLNNQLQNPIISIIAPIIGEKQATSMFVVKSIKISTPKSTGGLMGFMRKVETCKNCKK
PLEKGEGPLCKGCQNQTTEYYAKALYKVRSLEEKFSRLWTQCQRCSGSLHNEVLCSNKNC
DIFYMRVKTRKELQEKVIELGKW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagatctgctaatgaagtgtcacaggaaattgccaatgatgtgattgaattc
ggtgtcaacgaagaatcaagttcaactttcagcaatactaaaaagttgaaaagttttgat
catagtactttatctgaacctatcagttccatgaatattataccaacagataatttcgct
acacgtaaaacttcaggatatcaaccaaaaaattcttcttcttcttctaaaacaacagca
aatgtaccttcgagttttgagcaggagttacaaaatatgaaaaaacaaagcaaccagaga
caagtttggaccagatcccaattaccacaggattttaatgctgaaaactatgatatttct
ttccagcaattggatgcagaacaagctaatttgcctggtcaaaacgacgatggaacttcc
tatgtagttagactttttggtgttaccgactctggccattccattttgtgcaatgtcact
ggatttaagcactatttatatgttcctgctcctattaatttttctgaaagtgatatccct
tcttttgttgaatatctacaaaaaacatttgatcgtgaaggtggtgtgcattccatcgaa
tttgtttataaatatagtatttggggctacaatggtgcacaaaaattaccctttttgaaa
atttatactccaataccgagcacagttaataaacttagaacagcctttgaaaggggcaat
atttcatttaatgatgattggtttggtagtggtaccactacctatgataatatcgcgtat
ccgctaagactaatgattgattgtgggattgttggcatgtcgtggattaccttaaaccgg
gagcactataccttgatccctgaaaatgaaagggttagtaactgtcaaattgaggtcaag
gtaaattacaaagacttaattgcccatccatctgatggggaatggtcgaagagtgctcct
ttgcgaattttatcctttgatattgaatgtgctggtagagttggcgtgttcccggagcct
gcgatcgatcctgttatacagatagccaatgctgtttctattacaggcgagagcaaacct
tttattagaaacgtttttactgttaatacttgtttaccaatcaccgggtcggaaatttat
gattatgagaaggaggaagatatgttaatgcattggaaaaagtttctggtcaaagtagat
ccagatgttgttattggttataacactactaattttgatttaccatatttagttcaaaga
gcagaatctttgggtttaaatgagttcccgttttttggcagattaactaatgttagacaa
gaaattaaagaaactgttttctcatcaaaggcatatggtacaagagaatcaaaaaccatt
aatatagatggcagattgcagtttgacttactacaattcatccagcgtgagtatcaatta
agatcttacactttgaattctgtgtctgctcattttttgggggaacaaaaggaagatgta
caccacagtattattacaacattatatcatggtgatagtgaaactagaaggcgactagca
gtttactgtttgaaagatgcctatttgcctctaaggcttttggaaaggctaatgggcttg
gttaattacacggaaatggcccgtgttaccggtgttccattttcatatctattaactcgt
ggtcagcaaataaaggttatttcccaattgtttagaaaatgtttgactattgacacggtt
atacctaatatatcaagccaagggtctgatgaacaatacgaaggtgctaccgttattgaa
cctaaacgggggtattacgatgttcctattgctacattggattttaactctttgtaccca
agtattatgatggcccacaatttgtgctacactaccttatgtaacaaacagacggtggaa
agattgcacttagttaaagatgaggattatattataactccaaatggcgattattttgtc
actactaaacttaaaaagggtattttgcctgaaattttagaagaattactaggtgcaaga
aaaagggctaagaaagatatgaaaaatgaaactgatccctttaagaaaaatgttttgaat
ggtagacaattagccttaaagatttctgcaaattccgtctatgggtttaccggcgctacg
gtcggtaagctaccatgcttagcaatctcatcctcggttacctcatttggccgtgaaatg
attttaaaaactaaaaatgcggtgcaagaaaaatactcgataaaaaatggtcacgagcat
gatgcagttgttgtttatggtgacacagattctgtcatggtgaaatttggtaccgctgat
ttaaaggagtccatgagattgggtactgctgcagctgcatatgtttcttcattatttaag
catccaattaacctagaatttgagaaatgttattacccctatttgttgatcaacaagaaa
agatatgctggattgtactggaccaatccagaaaaatacgataaattagaccaaaaaggg
ttagcatctgttcgtcgtgattcatgtcccttggtttctgtcgtaatgaataaagtattg
aagatgattttaattaataaggatgttgatggtgctttggtatatatcaatagtatcatt
aatggaattttgcaaaatgaaattgatactgcacaattaatcatctcaaaaaaactagca
ccaaattataagaatccgcaaccacatgcagttctagctgatcgcatcaaacaaagggaa
ggggttggtcctaacgtgggtgatcgtgttgattatgttattatggctggtaatgacaaa
ttattcaatcgtgcagaagatccattgtatgttttggaaaacaatattcccattgactcc
aagtattatctaaataatcagttacaaaacccaattataagtataattgctcctattatt
ggagaaaaacaggcaacttccatgtttgttgtgaaatctatcaaaatttccacacctaag
agcactggggggctaatgggatttatgaggaaagtcgaaacgtgcaaaaattgtaagaaa
cctttggaaaagggagaaggtcctctctgtaaagggtgtcaaaatcaaacgacggaatat
tatgctaaagctctatacaaagtaagatctttagaagaaaagttttcacgtttgtggact
caatgtcaacgttgttcaggtagtttacacaatgaagttttatgttcaaataaaaattgc
gatattttttatatgcgtgttaagacgaggaaagaattacaagaaaaagtgatcgaattg
ggcaaatggtga
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