KEGG   Saccharomycodes ludwigii: SCDLUD_002851
Entry
SCDLUD_002851     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03018  RNA degradation
slud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SCDLUD_002851
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCDLUD_002851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slud03019]
    SCDLUD_002851
   03041 Spliceosome [BR:slud03041]
    SCDLUD_002851
Messenger RNA biogenesis [BR:slud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SCDLUD_002851
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SCDLUD_002851
Spliceosome [BR:slud03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SCDLUD_002851
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 70108168
NCBI-ProteinID: XP_045935292
LinkDB
Position
III:complement(1351945..1352283)
AA seq 112 aa
MNPGDNQTNNYSNNNQRKKFQGPKRDAIMDLAQYKYQSIRVQLTDNRVVTGTLKGYDQLM
NMVLDDAIEYIGDELDSTLLVGKRKLGFCVLRGTLLIMISPNYMQQKQESEK
NT seq 339 nt   +upstreamnt  +downstreamnt
atgaatcctggtgataatcaaactaataattacagtaataataaccagaggaagaaattc
cagggacctaaaagggatgctattatggatctagcccaatacaaatatcaaagcatccgc
gtgcaattgactgataacagagttgtaacaggtactttaaaaggatatgatcagttgatg
aacatggtactagatgatgctatagaatatataggggatgaattggattctactttatta
gtaggtaaaagaaaactgggcttttgtgttttaagaggtactttgttgataatgatcagt
ccgaactatatgcaacaaaaacaagaatcagaaaagtga

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