Saccharomycodes ludwigii: SCDLUD_002851
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Entry
SCDLUD_002851 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
slud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCDLUD_002851
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_002851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_002851
03041 Spliceosome [BR:
slud03041
]
SCDLUD_002851
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCDLUD_002851
mRNA degradation factors
5'-3' decay
Lsm complex
SCDLUD_002851
Spliceosome [BR:
slud03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SCDLUD_002851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
70108168
NCBI-ProteinID:
XP_045935292
LinkDB
All DBs
Position
III:complement(1351945..1352283)
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AA seq
112 aa
AA seq
DB search
MNPGDNQTNNYSNNNQRKKFQGPKRDAIMDLAQYKYQSIRVQLTDNRVVTGTLKGYDQLM
NMVLDDAIEYIGDELDSTLLVGKRKLGFCVLRGTLLIMISPNYMQQKQESEK
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtgataatcaaactaataattacagtaataataaccagaggaagaaattc
cagggacctaaaagggatgctattatggatctagcccaatacaaatatcaaagcatccgc
gtgcaattgactgataacagagttgtaacaggtactttaaaaggatatgatcagttgatg
aacatggtactagatgatgctatagaatatataggggatgaattggattctactttatta
gtaggtaaaagaaaactgggcttttgtgttttaagaggtactttgttgataatgatcagt
ccgaactatatgcaacaaaaacaagaatcagaaaagtga
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