Saccharomycodes ludwigii: SCDLUD_002898
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Entry
SCDLUD_002898 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCDLUD_002898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slud03041
]
SCDLUD_002898
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_002898
Enzymes [BR:
slud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCDLUD_002898
Spliceosome [BR:
slud03041
]
Complex A
U1 snRNP components
U1 related factors
SCDLUD_002898
Complex B
SCDLUD_002898
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCDLUD_002898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
70108215
NCBI-ProteinID:
XP_045935339
LinkDB
All DBs
Position
III:1461040..1463989
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AA seq
517 aa
AA seq
DB search
MSGNRDHQFNRNNFGSSRGGDFRGSHGSDRNGYNRGGNDYRGRRGGGFNNNQKVVNLDEK
PNWDLDTLPKFEKNFYSEDPKVAARSDAEIAEFRKENEMTIYGHDIPKPITTFDEAGFPD
YVLNEVKEEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPAIVHINAQPLLS
PGDGPIVLVLAPTRELAVQIQKECSKFGRTSRIRNTCVYGGVPRGQQIRDLQKGVEICIA
TPGRLIDMLETGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP
KEVQALARDYLHDYIQVNIGSLDLAASHNIKQIIEVVSQYDKRDRLVKHLEVASEDKESK
ILIFCSTKRACDDVTSYLRGDGWPALCIHGDKQQQERDWVLNEFRSGINYVINFDMPGNI
EDYVHRIGRTGRAGTKGTAISFFTEDNKPLANQLIGILREAKQDVPEDLLRYERVSHRNN
YHPRYGGRGGRGGRGGRGGYGGNRGFGGRNGGNNRRW
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaatagagatcatcaattcaatagaaataatttcggttcttctcgtggtgga
gattttagaggttctcatggtagtgatagaaatggttacaatagaggcggtaatgactat
agaggtagaagaggtggtggtttcaataacaaccaaaaagttgtcaatttagatgaaaaa
ccaaattgggatttagatactttaccaaaatttgaaaaaaatttttattctgaagaccca
aaagttgctgccagatcagatgctgagattgctgaatttagaaaggaaaatgaaatgacg
atttatggtcatgatattccaaagccaatcaccacttttgacgaagctggtttcccagac
tatgtcttaaatgaagttaaagaagaaggttttgaaaaaccaactggtattcaatgccaa
ggttggccaatggctttgagtgggagagatatgattggtgttgctgcaactggttctggt
aagactttgtcttattgtttgcctgctattgtgcatattaacgcccagccattattatcc
ccaggcgatggtccaattgttcttgttttggccccaacaagagaattggctgtacaaatt
caaaaagagtgctctaaatttggtagaacctctagaattagaaacacatgtgtctatggt
ggtgttccaagaggtcaacaaattagagatttgcaaaagggtgttgaaatttgtattgct
acaccaggtagattaattgatatgttggaaactggcaaaactaatttgaaaagggttact
tacttggttttggatgaagctgacagaatgttagatatggggtttgaacctcaaatcaga
aagattgttgatcaaatcagaccagatagacagactttaatgtggtctgctacttggcct
aaggaagttcaagctttagccagggattatctacacgactatatccaagttaacatcggt
tctttggatttggctgcttctcacaatattaaacaaattattgaagttgtttctcaatat
gacaagagagatagattggttaaacatttggaggttgcatctgaagataaagaatctaaa
atattaattttctgctctaccaaaagagcttgtgatgatgttacatcttatttaagagga
gatgggtggccagctttgtgtattcacggtgataaacagcaacaggagcgtgattgggtt
ttgaatgagtttagaagcggtattaattacgttattaactttgatatgccaggtaatatt
gaagactatgttcatagaattggtagaacaggtagagctggtactaaaggtacagctatt
tccttttttactgaagataataaaccattggctaaccaattgataggtattttgagagaa
gctaaacaagatgttccagaagatctattaagatacgagagagttagccacagaaacaat
taccatccaagatacggtggtcgtggtggccgtggcggacgtggtggtcgtggcggctat
ggtggtaatcgtggctttggtggccgtaatggtggtaataatagaagatggtaa
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