Saccharomycodes ludwigii: SCDLUD_003349
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Entry
SCDLUD_003349 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_003349
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_003349
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SCDLUD_003349
Membrane trafficking [BR:
slud04131
]
SNARE
SNARE associated proteins
Others
SCDLUD_003349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
70108666
NCBI-ProteinID:
XP_045934307
LinkDB
All DBs
Position
IV:complement(639071..640630)
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AA seq
519 aa
AA seq
DB search
MTPTSPKRQLSPRAYPGAVLLSPKLSNTIKGENSPIPVINSGSAASNYLDSYGLDSPTPI
NFTAMNVPEKLSNKNVENINNNTGFTLDCNNMVNFTQDVNQLVYWLNELTVSQQNTVMDN
LLSSLREEVLQYTKWKLDSLINSGYISPSPVASPIPQQQQANMVMNTMDEVLNGFSPLES
TLSAPATGGGNCNNAGGYLDSVIVTGSNVNDDQVHESHNLEEDANKTYLLNRQDYSNNNN
LAIPNRISSPQPSIYEYMLSPRPKSADPYRKETFKNVVASGDTNGNDGNTLTHDNNEGNK
TNNDTNVKTTVTNNVLNNTTVNNNSNMNKYSMRIMGSNGSNSNYKKYNGIKYLSANDNNS
NTSYYTGNNTNANNQHYHNGQYHNYTSVNGNYKNHGGGNKISHKNHNMISNNATVQTTAT
SNNATNTNTNTENFTIPANNSMDPVLLTDLKLLNNFPAWLKSLRLHKYTDVLKDVPWQEL
IYYDDPQLETIGVTALGARRKLLKAFNIVKEYKEQGLIQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacccctacctcaccgaaaaggcaactatcacctagagcatacccaggcgcagtacta
ctatcccctaaattaagcaataccattaaaggagaaaattcaccgattccagtcataaat
tctggttctgctgcatcaaattatttagattcatatggtttggattcccctactccaatt
aactttactgctatgaatgtaccagaaaaattgagtaataaaaatgttgagaatatcaac
aataatactggatttaccttggactgcaataatatggttaatttcacacaagacgtgaat
caattagtatattggctcaatgaattaactgtgtctcagcaaaatactgtgatggacaat
ttattatcatccttgagagaggaggttttacaatacactaaatggaagttggatagcttg
attaatagcggatacatttcgccatctccagttgcttcaccaattcctcagcaacagcaa
gctaatatggtaatgaatactatggatgaggttttaaatggattttcaccactagagtca
acgctgtctgcccctgcaaccggtggtgggaactgcaataacgctggaggttatttagat
tctgttatcgttaccgggagtaatgtcaatgacgatcaagtgcatgaatcgcataatttg
gaagaagatgcgaacaaaacgtacttattgaatcgacaggactatagtaataacaacaat
ctagctattccaaacagaatttcgagcccacaaccttcgatatatgaatatatgttaagc
cccagacccaagagcgctgatccatatagaaaggagacttttaaaaatgtggttgcttct
ggtgatacaaatggtaatgatgggaatactttaactcatgataataatgaaggtaataaa
acaaacaatgatacaaatgtaaaaactactgttactaataatgttttaaataacacaaca
gttaacaacaattctaatatgaataaatattctatgcgtatcatgggcagcaacggtagt
aatagtaattacaaaaagtataatggaattaaatatttaagtgcgaatgataataatagt
aacacttcatactatacaggtaacaacactaacgctaacaaccaacattatcacaatggc
cagtatcataattataccagtgtaaatggcaactataagaatcatggtggcggtaacaaa
attagtcataaaaatcataatatgatttcaaataatgctacagttcaaactaccgcaaca
agtaataatgccactaacactaatactaatactgaaaattttaccatacctgcaaataac
tctatggacccagtattattaactgatttaaaactgttgaataatttccccgcatggtta
aaatcattaagattacataaatatacagatgtcttaaaagacgtcccatggcaagaatta
atatactatgatgatcctcagttagagactatcggtgtcactgccttaggcgcacgtaga
aagttattaaaagcatttaacattgtcaaagaatataaagaacaagggttaatacaataa
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