Saccharomycodes ludwigii: SCDLUD_003494
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Entry
SCDLUD_003494 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCDLUD_003494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_003494
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_003494
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
SCDLUD_003494
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
SCDLUD_003494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
70108811
NCBI-ProteinID:
XP_045934441
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All DBs
Position
IV:<962800..>966213
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AA seq
1137 aa
AA seq
DB search
MSEKDILDGIVENIISQTSLENQIESDAQNILDQKSNEQETKRLERSLNKLTQLKKKREL
FQRRLNNANRISVKNKLRETIDTLNKDEISPLLQDIKDIKSRIKVIKPLKENDHYKNNKI
PNVQSDRQQGESETDYLIRVGKVTAFGNKSNFVLTNDEEGDTTDNYCEQRELGGEKQANS
TEVSRKRKASHNIYDSNLELQEMLPENVLIKGKKSKRQSRENQTTDISINEEVSDNKPID
KGRPEELSGSEFDEEEFESELEEEEVIYEGSEAEEEAASIKVKASNFVDDGDEYSYQKRL
KSWIKNRSKDRKIDKHPELPEWLKTHPDFKDAKLSNDLKIPGEIFSNLFNYQKTCVQWLW
ELRQQKCGGILSDEMGLGKTIQIIAFLASLHHSNKLDKPVLIVCPATVMKQWVSEIHKWW
PPFRAIILHSIGAGFDAKSGKEAMNDEKLEEMLVNSENFTYEDYIDQNKVKNAISNKTEA
CKLIDKVVECGHILVTTYVGLKINSDRLLKVNWSYVILDEGHKIRNPNSDISLTCKRVKC
RNRIILSGTPIQNNLIELWSLFDFIYPGKLGTLPIFQQQFAHPINMGGYANATNLQVQTG
YKCAVLLKDLITPYLLRRVKSDVAKDLPKKNEMVLFCKLTKYQRNKYMDFLNSDELTKIK
GGKIKVLYGIDVLRKICNHPDLLISKDFSYKRPADYGSASRSGKMQVVKQLLKVWHENGH
KTLLFTQSRQMLNIFQDFIEKRDPDLSGNLKVLRMDGTTNIGARQALVDKFNNENYDVFL
LTTKVGGLGINLTGADRIIIYDPDWNPSTDLQARERAWRIGQKRDVTIYRLMIAGSIEEK
IYHRQIFKQFLSNKILKDPNQKRFFKTNELQDLFTLGGSRGYNEDLNEQISTLTEKNNNK
SGGNNDDDLNAVSSMSGVSKLEGFYDSKEHDEIDKTEDDRLMKGLFGIESAVSHNNLVDS
HYKPSDDIITREAVRSAARAAEELKKSRNITKQYKIGTPTWTGKFGVAGKAKKNKKLSIT
NISKSKNISTKMLNGGGNGSSAILDTIKKLNNTDNPSPTIPSNAQIDAKLTKDVEDLSKF
RDFLRNKPNKFATSSEIINGTGFKLITEEDTLRLRAFLKQIATFDKLYKGWKLKEEK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaagatatattggatggaatagtagaaaatatcatttctcaaacaagctta
gaaaatcaaatcgaatcagatgcccaaaatatactagatcaaaagagtaatgaacaagaa
acgaaaagattagaaagaagtttaaataagctaacacaattgaaaaagaaaagagaatta
tttcaacgaagattaaacaatgcaaataggataagcgttaaaaataaactaagagaaact
attgacacattaaataaagatgaaatcagcccacttctacaagacataaaagatattaaa
agcagaattaaagttataaaacctctgaaagaaaatgatcattataaaaataataaaatt
cctaatgtccagtcagacagacaacaaggtgaatctgaaacagattatttgataagagta
ggtaaagttaccgcatttggtaacaaatcaaattttgtactcactaatgacgaagaaggt
gatactaccgataattattgcgagcaacgagagttaggaggggaaaaacaggcaaattcc
accgaagtaagtagaaaaaggaaagctagtcacaatatctatgattctaatctggaacta
caagaaatgcttccagaaaatgtcttgataaagggaaagaaatcgaagagacaaagtagg
gaaaatcaaactactgatatatctataaatgaagaggtatcagataataaacctatcgat
aaagggcgtccagaagagttgtcgggctctgaatttgacgaggaagaatttgaatctgaa
ctcgaagaggaagaagtaatatatgaagggagtgaagctgaggaagaggctgcctcaata
aaagtaaaagcttcaaattttgtggatgatggcgatgaatatagttatcaaaaaagatta
aagtcatggataaaaaataggtccaaagataggaagatagacaaacacccagagttacca
gaatggcttaaaactcacccagatttcaaggatgctaaactatccaatgatctcaaaata
cccggagaaattttctccaacttgtttaactaccaaaaaacttgcgttcaatggctctgg
gagctacggcagcaaaaatgcggggggattttaagtgatgaaatgggattaggtaaaact
attcaaattattgcatttctggcttctctacatcattcaaataaattggataaaccagta
ttgatcgtatgtccagcaactgtgatgaaacaatgggtcagtgaaatacataaatggtgg
ccaccattcagagcaattattttgcattctattggcgctggatttgatgccaaatcaggt
aaagaggccatgaacgatgaaaaattggaagagatgctagtaaattcggaaaattttact
tatgaagattatatcgatcaaaacaaagtgaagaacgcaatttccaacaagacagaagca
tgtaaattgattgataaagtggttgagtgtggccacatattggtcaccacttatgtcggt
ttgaaaataaattctgacaggttgttgaaagtaaattggtcgtatgttatattggatgaa
ggccacaaaatcagaaatccaaattcagatatatctttaacatgtaaacgtgttaaatgt
agaaatagaataattttgtctgggacaccgattcaaaacaacttgattgaattatggagt
ttatttgattttatttaccctggaaaattaggtacacttcccatatttcaacaacaattt
gcacatccgataaatatgggtggctatgccaatgccacaaacttgcaagttcaaactggc
tacaaatgtgcagtattgcttaaagacctaataactccatatctactaagaagggtgaaa
tcggatgtagctaaggatctacccaagaaaaatgaaatggttttgttttgcaaattaact
aaataccagcggaacaaatatatggattttttgaactctgatgaactgacaaaaattaag
ggtggcaaaatcaaagttttatatggaattgatgtattgaggaaaatatgcaatcatcca
gatttgttaataagtaaagatttcagctataaaagacccgcagattatggaagtgcctca
agatctgggaaaatgcaagtggtcaaacaattgttgaaagtgtggcatgaaaatgggcat
aaaactttgctattcacacaatcaagacagatgcttaacattttccaggactttattgaa
aaaagagatcctgatttgtcaggcaatttaaaggtgttgcgtatggacggtacgacaaat
attggggcaagacaagcgcttgttgataagttcaataatgaaaactatgacgtctttctt
ctaacgaccaaagtgggtggattaggcatcaatttgactggtgcagatagaattattatc
tatgatcctgactggaatccatccactgatttacaagctcgtgaacgtgcctggaggatt
ggccagaaaagagatgttacaatatacagattgatgatagctggttctatagaagagaaa
atttaccataggcaaattttcaaacaatttttatccaataaaatcctaaaagatccgaac
cagaaaagatttttcaaaacgaatgaattacaagatttgttcaccttgggaggcagtcgc
gggtacaatgaagatttaaacgaacagatcagtactctgacagaaaaaaataataacaaa
tcaggtggcaataatgatgatgatttgaatgcagtttcgtcaatgagtggtgtttctaaa
ttggagggattttatgattctaaagaacatgatgaaattgataaaaccgaagatgaccgt
ttaatgaaaggattatttggcattgaaagtgcagtcagccacaataatttggtggattct
cattacaaaccttctgatgatattataactcgggaagcggttagatcagcggcaagggct
gctgaagaattaaaaaaatctagaaatataaccaaacagtacaagataggaacacccaca
tggacaggtaagtttggagttgctggaaaagctaaaaagaataaaaaattgagtattact
aacataagtaaaagtaaaaatatatcaactaaaatgcttaatggaggtggaaatggttct
tctgcaattttggatacaattaaaaaattaaataatactgacaacccatcaccaaccata
ccaagcaatgctcaaattgacgcaaaactaactaaagacgttgaagatttatccaagttt
agagattttcttagaaataaaccaaataagtttgctacttcttcagaaattataaatggt
actggatttaaacttattactgaggaagatacacttcgattaagggcattcttgaaacaa
attgccacatttgataaactgtataaaggttggaaattaaaagaggaaaaataa
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