Saccharomycodes ludwigii: SCDLUD_003659
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Entry
SCDLUD_003659 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slud01009
]
SCDLUD_003659
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_003659
Enzymes [BR:
slud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCDLUD_003659
Protein phosphatases and associated proteins [BR:
slud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SCDLUD_003659
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCDLUD_003659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
70108976
NCBI-ProteinID:
XP_045934595
LinkDB
All DBs
Position
IV:complement(1338183..1340624)
Genome browser
AA seq
813 aa
AA seq
DB search
MNSINDDDTDDMMLMNFSTSLPPTDTTKNTISKSKITGGSWKDRRRLQNMLNGKTNNDKK
RTTAIKNINDKSNDKSIKTSKSESTVQNKGAQRETLEESINNKESLDHKVTKSRPPQQTD
YNLNKQIVSSLFTSNKSIFTTTNNNERSGEKANPSNAPLLSEQNTFESLGIDNPILLKNL
KDRLKVTKPTKIQKLAIPKILSKNDLKKQQKTHENGTKKKNLFIHAQTGSGKTLSFLLPL
LNTILSLNEDADGNTGSSKLNRNSGCFALIITPTRELASQIYTVLNTITVHYLVPCLLIG
GEKKKSEKARLRKGVNFIIGTPGRILDHLTNTRSLKNNQLASLKYCILDEGDKLMELGFE
DTLKQIFEIINQEVTNINYQMILCSATKSDNVGKLGDELLKSYYTVSSSSSDNNTGLNLD
ANTVPDQLLQKIVIVPSKLRLVTLAGCLSNITMQNMKEKANKKVLRTIVFLSCADSVDFH
YDVFAHGSTRIKEILNDTVVSTTNGNTILPSFLKQQKQQEKEEEEEKEQNKKQEEKGKEG
ESSNKYRTNYVFHKLHGSLSQQVRTATLKHFCSDKGQEGKHLILFCTDVASRGLDLPHVS
TVIELDPPFAVEDHLHRIGRTARAGIGGESILFLLPGEEEGYMDYIKPFHPKGWKLMKYD
KDVLQMAFSNIDVARGDKRRISNLENKKSFESAWDSNATTWHLNVERRVLEDSKFKNLAI
NGFTSHVRAYATHISKEKQFFNVKFLHLGHLCKSFGLRERPKNLGMMYSNNGNKRSKDGN
EDSSKRRKKEDSRSKMLRLAKLAVKQSSDEFNY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtatcaacgatgatgacaccgatgatatgatgctaatgaattttagcacatct
ctgccaccaactgataccacaaagaatactatttctaaaagtaaaattacaggtggttca
tggaaagaccgtagaagactacaaaacatgttaaatggtaaaaccaacaatgataagaaa
agaacaactgctattaaaaacatcaatgataaaagcaatgataaaagcattaaaacttca
aaatcagaatctactgtacagaataaaggagcacaaagggaaactttagaagagtctatt
aataataaagaatctttagatcataaggtcaccaaaagtagaccaccacaacaaacggat
tataacttgaataagcaaattgtttcttcattatttacatccaataaaagtatatttact
actaccaataacaatgaacggagtggtgaaaaagcaaacccgtctaatgcacctttatta
tctgaacaaaacacttttgaatcgttaggtattgataatccaattttactcaagaatttg
aaggacaggttgaaagttacgaagcccactaaaattcaaaaattggctatcccaaaaatc
ttatcgaaaaatgatttaaaaaaacaacagaaaacacacgaaaatggtactaaaaagaaa
aatctttttattcatgcacaaacgggtagtggtaaaactttatcatttctattgcccctt
ttgaataccatattatcattaaatgaagatgcagacggtaatactggaagttcaaaattg
aatagaaattctgggtgttttgcattaataattacaccaactagagaattggcatcccaa
atatatacggttttaaacaccataacagtacattatttagttccgtgtttattgattggg
ggtgaaaagaaaaagtcggaaaaggcaagattaagaaaaggtgttaatttcattattggc
acgccaggcagaattttggatcacttgacaaatacacgttctttgaaaaataatcagcta
gcatcgttaaagtattgtattttagacgaaggagacaaattaatggaattgggctttgaa
gacactttgaaacaaatatttgaaattattaatcaagaggttaccaatataaattaccag
atgattttatgctccgctactaaaagtgacaatgtaggtaaattaggagatgaattgtta
aaaagttattatacagtcagctccagttcatcagataataacactggtcttaatttggat
gcgaatacggtacctgatcaattattgcagaaaatagttattgtgccatctaaattaaga
ttagttacactagctggatgtctaagtaacattactatgcaaaatatgaaagaaaaagct
aataagaaagttttgaggactattgttttcttatcctgtgcagatagtgttgattttcat
tatgatgtttttgctcatggctcaactcgaattaaggaaatattgaatgatactgttgtt
tctacgacaaacggtaatacaattttaccatcatttttaaaacaacaaaaacaacaagaa
aaagaagaagaagaagaaaaagaacaaaacaaaaaacaggaagagaaaggaaaggaggga
gaatcaagtaacaaatataggactaactatgtgtttcataaattacatggttctttatct
cagcaagtacgtactgccacactaaaacatttttgttctgataaaggccaagagggtaag
catttgatattattctgtactgatgttgctagtagaggtctagatttgcctcatgtttca
acagttatcgaattagatccaccgtttgccgttgaagatcatctacatagaattggtaga
acggcaagagcaggtattggaggtgagagtattttatttttgttacctggtgaagaggaa
ggatatatggattatattaaaccatttcatcctaaaggttggaaattaatgaaatatgac
aaggatgtattacaaatggcgttttctaacattgatgttgctagaggtgataaaaggaga
attagtaatttagaaaacaagaaatcctttgaaagtgcgtgggatagcaatgccaccacc
tggcatttaaatgttgaaagaagggttttagaagattctaaatttaaaaatttagctatc
aatgggtttactagtcatgttagagcttatgctacacatattagtaaagaaaaacaattt
tttaatgtaaaatttttacatttgggacacttgtgtaaaagttttggtctcagagaaaga
ccaaagaatttgggtatgatgtatagtaataatggtaataaaagatcgaaggatggtaat
gaagatagcagcaagcgtaggaagaaagaggatagtaggtctaaaatgttgagacttgct
aaactggcagttaaacaaagttcagatgaattcaattattaa
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