KEGG   Saccharomycodes ludwigii: SCDLUD_003905
Entry
SCDLUD_003905     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03030  DNA replication
slud03410  Base excision repair
slud03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SCDLUD_003905
   03410 Base excision repair
    SCDLUD_003905
   03420 Nucleotide excision repair
    SCDLUD_003905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slud03032]
    SCDLUD_003905
   03400 DNA repair and recombination proteins [BR:slud03400]
    SCDLUD_003905
Enzymes [BR:slud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SCDLUD_003905
DNA replication proteins [BR:slud03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    SCDLUD_003905
DNA repair and recombination proteins [BR:slud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      SCDLUD_003905
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 70109222
NCBI-ProteinID: XP_045933558
LinkDB
Position
V:277016..283582
AA seq 2188 aa
MSKNVYSRSNNSLNFSYSIAAQQNIQAAKIDEIDSKMGFDRFIPSEVDISEEKIGWLVNM
HPTTIPNTNTTSSAFHTGVSAVDFYFLDEEGGYFKTTIKYPPYFLVMVQDEHKVTDVEEY
LKKLLENSLKNSEIVYKDDLQQPNHLLGLKRSLIKLNFSNMNSLFEARKLLKPILKENED
KKNQSIRSKHNNNNYYKEDIKSLISDIREYDVPYHVRVSIDKNIRVGKWYKVTKDGLEEC
TERISFADPVVMAFDIETSKAPLKFPDSEIDQIMMISYMIDGEGYLITNREIISTDIEDF
EYTPKPEYVGNFTIFNEPDEYNLLKKFFEHIKDVRPTVIATFNGDFFDWPYVDNRAKFHG
ISMFDEIGFGPDIEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTKAKLGYNPIELD
PELMLPYAYEKPQQLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTL
CEMLLMVQAYDSGILLPNKHTDPIERFYDGHLLETETYVGGHVESLEAGVFRSDLPNDFV
IDPTAIDELLEDLPNALKFSIEVECKANIDDVVNFEEIKLEISKKLMDFKTTCKRSEFPL
IYHVDVASMYPNIMTSNRLQPDSMKSERDCASCDFNRPGKTCDRRLNWAWRGDFFPAKMD
EYGMVKRALQNETFPNKNKKSPKKYLTFDELSYADQVAHIKKRLTDYCRNVYHKVKTTET
VEREAIICQRENPFYVNTVRSFRDRRYDYKGRAKEWKKKLASIPSTEKHARDEAKKMVVL
NDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARALVERLGRPLELD
TDGIWCILPKSFPENFQFKLKNGKKLFMSYPCSMLNYKVHAKFTNHQYQTLVDASKYKYE
THSDNSIFFEVDGPYKAMILPTSKEEGKGIKKRYAVFNTDGSLAELKGFELKRRGELQLI
KNFQKDIFKTFLEGSTLEECYQVVAKIADRWLDILVNKGAMLEDEDLIDLICENRSMSKT
LKEYEGQKSTSITTAKRLGDFLGGDMVKDKGLQCKYIISKKPFNAPVTERAVPVAIFSAD
LNVKRTYLKKWLMDSSLNDFDPRAIIDWEYYKERLGSTIQKIITIPAALQNVENPVPRVV
HPDWLKKRLAVKADKFKQVSLTKFFKKTNEYVPIRDIEDCFSSTNHLTTVATNPKVSRVI
TRNKRRREKKDKNEEDESLKLPKEIPNPDENYVEWLNYSKLKWKIQKQERERREQLFGAK
SSIMGRTTLGNMMKKKAESYASATWEILQYKPTSTPGILNVLTLINNKVHTLKFKVPKTI
YISFKNSFVPELETSNKCSINKINAMLPNENELDKSITSNVYKVVISERAYEEQSTDPSS
IFNNGHVSGIYESHIPSAERTIMDLGCSVEFSSNVKGALGAGLEQGFQISDLRSADYDRY
LNSFSMDICYILHMPTTIGYEFFTIWNSWSDVVHVYVLKPSAAAQEISATSVENLYKSQY
AKKVKSLDQHRSIVDASPQLIYNFEYHTDLLKLYKKVSKKIEVFKDERGPKILLLLQSPF
KSKLLKVLRVLNTLPIVELSITELKVQQLKWHTAISKRLVNHILSLGSWIHNLLLLSRYS
GIPICNLKLDNMGYMIDILFSRKLKKENIVLWWNEKQPLPDYGGVEQDYDVSLLSEVKFD
PINHPNIYDSVVLEVELNNLTINTILTSSLANEAEGNDLAELGDSIIKDGFNSNSLSILR
QLLRQFWDDAIKGAHVADSLLQYFIMWVQNPDSKLFDNSLRYYVQTSANKTLLHVIKEFE
NLGAFCVYADKSKILLKTPKFTVENSYAYGQYLVKAIRADPIFTYLDLKINKYWDLLIWM
DQFNYGGRAATTIQEKEKQDLWAFNEWKIKDFLPKIYKPEFEDWIVIILDSLIKSKETAL
QESVDGTQRITQLYFKRNMSEKNLENEKENVGTDGGEAGDDSNDFLEGFTNVFYLPMIKR
FKKLYDTQQEYILNPAFSADYEFEKLPGTLSRRKSPLLELTIYLCHIMLLSKKRHLEVRK
LRKELLKIFEMREFDSEADFVNPAISLVVNNFVCEYCAHEREIDFCRDFQEAILQCGRCG
KAYSVNVLQEQLIQKLESQIQCYLLQDLECAKCHKIREDNMSEYCPCSGKWVETVSRSRL
TLNLSVFKQIAKHFDFAILGSALEEMGI
NT seq 6567 nt   +upstreamnt  +downstreamnt
atgtcaaaaaatgtttattctcgatccaataactcattaaatttctcctattcaatagct
gctcagcaaaatatacaagctgccaagattgatgaaatcgattcaaagatggggtttgat
agatttattccgtcagaagttgatattagtgaagaaaaaataggttggctagttaatatg
catccaacaactattccaaataccaatacaacctcttctgcttttcatactggagtgtct
gctgtagatttctattttttagatgaagaaggtggatattttaagacaaccattaaatat
cccccttatttcttggttatggtacaagatgaacacaaggtgactgatgtcgaagaatat
ttaaagaaacttttggaaaattctttaaagaattcagaaatcgtttataaagatgaccta
caacagccaaatcatttgctgggactaaaaagaagcttgattaaattaaatttttccaat
atgaatagtttatttgaagctagaaaattgttgaaacctatattaaaggaaaatgaggat
aaaaaaaaccaatccatcagatctaaacacaacaataacaattattataaagaagacatt
aaaagcttgatctccgacattagggaatacgacgttccatatcatgttcgtgtttccata
gataaaaatattagggtcgggaaatggtataaggtcactaaagatggtttggaagaatgc
acagaaagaatttcgtttgcagatccagtagttatggcctttgatatcgaaacaagtaaa
gctcctttgaaattccctgattccgaaattgatcaaattatgatgatttcttatatgata
gatggtgagggttatttaattaccaacagagaaatcatttccaccgatattgaagatttc
gaatatacccccaagccagagtatgtcggtaatttcacaattttcaatgaacctgatgaa
tacaatctacttaaaaagtttttcgaacacataaaagatgtaaggcccacagtaatagca
acctttaacggtgacttttttgactggccatacgttgacaatagagccaagtttcatgga
ataagtatgtttgatgaaattggttttggtccagatattgagggggaatataaatcttca
tactgttctcatatggattgtttccgttgggtcaagcgtgattcatatttaccacaaggc
tctcaaggtttaaaagctgttactaaggcaaagttaggctataatccaatagaattggac
ccagaattgatgcttccatatgcatacgaaaaacctcagcaactatccgagtattctgtt
tctgatgccgtcgccacctattatctatatatgaagtatgttcaccccttcattttctcc
ctatgtactattattccgttaaatccagatgaagttttaagaaagggtactggtacttta
tgcgaaatgcttttgatggtccaggcttatgatagtggaattttacttccaaataaacat
actgacccaatagaaagattctatgatggtcatctattagaaacggaaacttatgttggc
ggacacgtcgaatctttagaagccggtgttttccgtagtgacctgcctaatgattttgtt
attgatccaaccgctattgatgaactactcgaagatttaccaaatgctctgaaatttagt
attgaggtggaatgtaaagccaatatagacgatgtagtgaattttgaggaaataaaactg
gaaatatccaaaaaactaatggatttcaaaaccacttgtaagagatcggaattcccattg
atttatcacgtcgatgtggcatcaatgtacccaaatattatgacatccaataggttacaa
ccggatagtatgaagtccgaacgtgactgtgccagctgtgacttcaatagacccggtaaa
acatgtgatagaagactaaactgggcttggagaggagattttttccccgctaaaatggat
gaatatggtatggttaaaagagctttacaaaatgagactttccccaataagaacaaaaaa
tcacctaaaaaatacttgacatttgacgaattaagttacgcagatcaggttgctcacatt
aaaaaaagattgactgattattgccgcaacgtttatcataaagtcaaaaccactgaaact
gttgaaagggaagccattatttgccagagagaaaatccattttatgtcaacacagttaga
tcattccgtgataggcggtatgactataaggggagagcaaaggaatggaaaaagaaatta
gccagtatcccatctaccgagaaacatgctcgtgatgaggcgaaaaaaatggttgtttta
aatgactctcttcaattggcccacaaagttatcttgaactctttttacggctatgttatg
aggaagggttccagatggtatagtatggagatggctggtattacctgtctaactggtgcg
acgattattcaaatggctagagctttagttgaaagactaggtagacctttagagttagat
acagatggtatttggtgtatattgccaaagagcttcccggagaatttccaatttaaacta
aaaaacggtaagaaattattcatgtcatatccatgttccatgttaaattataaagtccat
gctaagttcaccaatcatcagtaccaaacgttagttgatgcttcaaaatataaatatgaa
acccattctgataactctattttttttgaagtggatggtccatataaggcaatgattttg
ccaacttccaaagaagaaggcaaaggtattaagaaaaggtatgcggtctttaacactgat
ggctctttggcagaattaaagggttttgaattaaaaaggcgtggtgaattgcaattaatt
aaaaattttcaaaaggatattttcaaaacatttctagaaggcagcactttagaagaatgt
tatcaagtggttgctaaaattgcggatagatggttggatatattggtcaataagggtgct
atgctagaagatgaagatttaattgatttaatttgtgaaaatagaagtatgtcaaaaaca
ttaaaagaatatgagggtcaaaaatctacctcaatcactacagcaaaaagattgggagac
tttttaggtggtgacatggtgaaagacaaggggctgcaatgtaagtatattataagtaaa
aaaccatttaatgccccggttaccgaacgtgctgttcctgttgccattttttctgcagat
ttgaatgttaaaagaacctatttaaaaaaatggttaatggattcttccttaaatgatttt
gacccgagggccattattgattgggaatattataaagaaagattgggatctactattcaa
aaaattattactattccagctgcattacaaaacgtagagaacccagtacctcgtgtagtg
catcctgactggctaaaaaaaagactcgccgtcaaagccgataaattcaagcaagtcagt
ttaacaaaattctttaaaaaaacgaatgaatatgttccaataagggatatagaggattgt
ttttcttcaactaaccatttaactactgtagctaccaaccccaaagtttctagggtaatc
acaagaaataaacgtagaagggagaaaaaggataaaaatgaggaggacgaatcacttaaa
ctaccaaaagagattccaaacccagatgaaaattatgtcgaatggttaaactattctaag
cttaaatggaaaattcaaaaacaggaaagggaaagaagagagcaattatttggtgctaaa
agctctattatgggaagaacaactcttggtaacatgatgaaaaagaaagctgagtcatat
gcaagtgctacttgggaaattctacaatacaagcctactagcacccctggtattctaaat
gttttaacattgatcaacaataaagtccatactttaaaatttaaagttcccaagacaatt
tatatttcttttaaaaacagttttgtacctgagcttgaaacttcaaacaaatgttctatt
aataaaattaatgctatgttaccaaatgaaaatgaactagataaatctatcacttccaat
gtttacaaagttgtgatttcagaaagagcttatgaggagcaaagtacggatccatccagt
atatttaacaatgggcacgtttcaggtatatacgaatcgcatattccgtcagctgaaaga
accattatggatctaggctgcagcgtagaatttagctccaatgtgaaaggggcattagga
gctggtttggaacaaggcttccaaatatcagatctaagaagtgcagattatgatagatat
ttgaattcctttagtatggacatttgttacatattacatatgccaaccacaattggatat
gaatttttcaccatttggaacagctggagtgatgtggttcatgtttatgttttgaaacct
tcagctgctgctcaagaaatatcagccacttcagttgaaaacttgtataaatcacagtat
gcaaagaaagtgaaaagtttagatcagcatcgctctattgttgatgcttcgccgcagttg
atatataattttgaatatcacaccgatttgttaaaactttataagaaggtatctaagaag
attgaggtatttaaagatgaaaggggtccaaaaatattgctgttattacaatctccgttt
aaatctaagttgctgaaggttttgcgtgtacttaacacgttgccaatagttgaactgtct
attaccgaattaaaagtccagcaattgaaatggcataccgctatttccaaaagattggtt
aaccatattctttcattaggctcatggatacataatcttttgttgttatccaggtatagc
ggcattccaatatgtaatttaaaactggataatatggggtatatgattgatattttattt
tcaagaaaacttaaaaaggaaaatattgttttatggtggaacgagaaacagccattgccc
gattatgggggcgtggaacaagattacgatgtttctttgctgagtgaagttaaatttgat
ccaattaatcatcctaatatttatgattctgttgttttagaagtggagctcaacaatttg
accattaacactattctcacgtcttctctagctaatgaggcagagggaaacgatttggct
gagttgggtgattcgataataaaagatgggtttaattcaaactcattatcaatattgaga
caattattaaggcaattttgggatgacgccattaaaggtgcacatgtagcagattcttta
ttacaatattttattatgtgggttcagaaccctgattcaaaattgtttgataattctttg
aggtattatgtccaaacgtctgcaaacaaaacattgctacatgtgatcaaagaatttgaa
aatctgggtgcattttgtgtttatgcggacaagtctaaaattttgttaaagacaccaaaa
tttacagttgaaaattcgtatgcttatggacaatatttagtaaaagcaataagagcggat
cctatatttacgtatttagatttgaaaatcaacaaatattgggatttgttaatatggatg
gatcaatttaattatggtggtcgtgcggctacaactatacaagaaaaggaaaaacaggac
ttgtgggcatttaatgaatggaaaatcaaagatttcctgcccaaaatatataaaccggaa
tttgaagattggattgtcattattttggatagtttaattaaatcgaaagagactgcgtta
caagaatctgtggatggtacccaaagaataacgcaactttattttaaacggaacatgtct
gaaaaaaaccttgaaaatgagaaagaaaatgttggcaccgatggaggtgaggctggcgat
gattcaaacgattttttggagggttttacgaatgtgttttatttaccaatgattaaaagg
tttaaaaaactttacgatacccagcaagaatatattttaaatcctgcatttagtgcagat
tacgaatttgaaaaattacctggtacgctatctcggagaaaatccccattgttggaacta
accatttatttgtgtcatataatgctgctgtcaaagaaaagacatttagaagttcgtaaa
ttaagaaaagaactattgaaaatattcgaaatgagagaatttgattcggaagctgatttt
gttaatccggcaatctctttagtggtcaacaactttgtttgtgaatattgtgcacatgaa
agagaaattgatttttgtagggattttcaagaagcaattttgcaatgtgggagatgtggc
aaagcttatagtgtgaatgttctccaagaacaattaatccagaaattagagtcccagata
caatgttatttattacaagatttagaatgtgcaaagtgtcataaaattagagaggataat
atgtctgaatattgtccatgttctggtaaatgggttgagacagtttctaggtcaaggtta
actttaaatttatcagtttttaagcaaattgctaaacattttgattttgcgattttggga
tcggcattagaagagatgggtatttga

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