Saccharomycodes ludwigii: SCDLUD_003922
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Entry
SCDLUD_003922 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03440
Homologous recombination
slud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCDLUD_003922
03450 Non-homologous end-joining
SCDLUD_003922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slud03032
]
SCDLUD_003922
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_003922
DNA replication proteins [BR:
slud03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
SCDLUD_003922
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
SCDLUD_003922
BRCA1-C complex
SCDLUD_003922
NHEJ (non-homologous end-joining)
MRX complex
SCDLUD_003922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
AAA_21
SMC_N
SbcC_Walker_B
AAA_13
AAA_29
ABC_tran
AAA_16
BRD4_CDT
AAA_22
Motif
Other DBs
NCBI-GeneID:
70109239
NCBI-ProteinID:
XP_045933574
LinkDB
All DBs
Position
V:314982..318890
Genome browser
AA seq
1302 aa
AA seq
DB search
MSSIYKLSIQGIRSFGADDRETIEFGKPLTLIVGTNGSGKTTVIECLKYATTGDLPPNSK
GGAFVHDPKITHEKDVRAQVRFSFTSVNGLNMIVTRNIQLIVKKTTTTFKTLEGQLVTVN
DQNERSTISTRAAELDTKVPLYMGVPKAILEYVIFCHQEESLWPLSEPSNLKKKFDEIFQ
AMKFTKAIDNLKVIKKDMGIDIKLLKQSVEHLKSDRNKSKVTKLNITTLQEKIKTYELQV
QKFRTQLDEITEQSNKLFDSNQDFQNVLSKLESLRNSKISLQEQIETLTNTVDSPLNMGK
SDLLKKLSNFTANLEAKKLQIENWKSNELSKRNANLNNLRLKYDELIKRDGELVSWEKNT
NLKKEQLVQTIKIFKEEFDLENVSLDSLTTYYNKLNAEVGNLVEANAIELENSNRDISRL
QNEQSIELQSIKYAITDKDKLSHEVAELNKKIANINYTESDIESIKENIRNYQEKLHEIE
KRNSDNSFDQKINANKKELISLENEIDIVQQKIIDSNRQSDLMAQFSIIKEDFTSTKSKL
AQKAADFKNHTELLKHLEFTIPSDDKMLCSTFKKKFITFADKAQTLSLIYREAQDNYNKS
EYSYLSIQENLEEYDKQAQKLRSKIKSILPEDCTIDDYDTILQETEESCQTAVENLKMHK
TTLEFNLKALQFANVKNCCYLCQRNFEDLHDKLKLVKELEKRTTSKFEETLKKQVNEEKA
YLSDLRKAGPSLVSLKDLLSKIEMTKSEKNLIQEETKKLEALLKDKREQHERTQSLVKQI
TEVLKPLGEEIARLDAELEFISKKKNNIEKEVSIYQKNGPLETIQELQQKQTRINERGKK
LRKEIDELQVLKDSNSKEFDKVCSLLRDNTFKQNEAEKSLVDKKNMELESVKKNDAIKSL
TLKITEGESFVAKQTKHIQHLEIELSNKKVEFKAIENETRSIFDTFVKNKDLYINLKNDI
HKFDTEGSVKLKHVKEQIEGLKKEMSHITDEIAEFNDKINAATRTLQDSINQEKNLKLNI
DLLNLKDKLLSIEQEILKLDVQNAEAKKKEYQQESLRLRNMFEKLNAENAGKLGEIRQLE
NQIKALTDQLKTDYKDIDAKYEHEWVKLQAKTLVTDDIDTYSKALDSAIMKYHSLKMKDI
NRIIDELWKKTYSGTDVDTIMIKTDEISNTRGKSYNYRVVMYKQDAELDMRGRCSAGQKV
LASIIIRLALSETFGINCGVIALDEPTTNLDEDNIASLAKALHNIIQYRRSQRNFQLIVI
THDESFLNYMNASEFTDHFFRVKRDDRQKSQIEWVDINRITG
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatatacaaactatcaattcaaggaattagatcatttggtgcagatgatcgt
gaaacaattgaatttggaaaacctttaacattaattgtcggtacgaatggttcaggcaag
accactgttattgaatgtttaaagtatgccacaactggtgatttacccccaaatagtaaa
ggtggcgctttcgtccacgatcctaaaatcactcacgaaaaagacgttagggctcaggtt
cgtttttcttttactagcgttaatggactaaacatgatcgttactcgtaatattcaacta
attgttaagaaaactaccactacttttaaaactttggagggccaattagtcactgttaat
gaccagaatgaaaggagtaccattagtacaagggctgctgaacttgacactaaagtaccg
ctctatatgggcgtccctaaagccatcttagaatacgttattttttgtcatcaagaagaa
agtttatggccacttagtgaaccatctaatctaaaaaaaaaatttgatgaaatttttcag
gccatgaagtttaccaaagctattgataacctaaaagtcattaaaaaagatatgggcatc
gatattaaactattgaaacaatcagtagagcatttgaaatcggatagaaacaaaagcaaa
gttacaaaattgaatataacgactctacaggaaaaaatcaaaacctatgaattgcaagtt
caaaaatttagaacacagctagacgaaattactgaacaatcaaataaattgtttgattct
aaccaagactttcaaaatgttttgtccaagttagaaagcttgcgtaatagtaaaatttca
ttacaagaacaaattgaaacactaaccaatacagtagattcgcccttgaatatgggtaaa
tctgatcttctaaaaaaattatcaaattttaccgctaatttggaagctaaaaaattacaa
atagaaaattggaaatctaatgagttatccaaaagaaatgccaacttaaataatttacgt
ctaaagtatgatgaattaattaaaagagatggcgagctcgtatcttgggaaaaaaatacc
aatttgaaaaaagagcaattagtacaaaccatcaaaatttttaaagaggaatttgattta
gagaatgttagcctggattctctgactacgtattataacaaattaaatgctgaagttggt
aatttagttgaggcaaatgctattgaattagaaaattctaatagggatatatccagacta
caaaatgagcaaagtattgaattacaaagtattaagtatgctattacagataaagacaag
ttgagccacgaagtagcagaattaaataaaaaaatagccaacattaattacacggaatct
gatatagaatctattaaagagaatattcgtaattaccaagaaaaacttcacgaaatagaa
aagagaaattctgataattcttttgatcaaaaaatcaatgcaaataaaaaggaattgatc
tcactagaaaacgaaattgacattgttcaacaaaaaattattgattctaatcgtcaatca
gacctaatggctcagttttcgataataaaagaagattttacttcaactaagtccaaattg
gcgcaaaaagctgctgatttcaaaaatcataccgaactattaaaacatcttgaatttaca
atcccatctgatgataaaatgctctgttctacttttaaaaaaaaatttataacgttcgca
gataaagcacaaactttgtctctcatctatagagaggctcaagacaactataataaatct
gaatacagttacttgagtattcaagagaatttggaagaatatgataagcaagctcaaaaa
ctcagatctaagatcaaaagcatattgcctgaagattgtactattgatgattatgataca
attttacaagaaacagaagaatcctgtcaaactgctgtagagaatttgaaaatgcacaaa
acaactttagaatttaatttaaaggcgttgcaatttgctaatgtaaagaattgttgctat
ttgtgtcaacgcaactttgaagacttgcatgataaactgaaattagttaaagaattggaa
aagcgaacaacctcaaaatttgaagaaactttgaagaaacaagttaacgaggaaaaagca
tatctaagcgatttacgtaaggcaggtccatcgcttgtttccttgaaagatctactctct
aaaattgaaatgacaaaatcggaaaaaaatcttattcaggaagaaaccaagaaattagaa
gccttattgaaagataaaagagagcagcatgaaaggacacagtcgcttgttaaacaaatt
actgaagtattaaaacctttgggcgaggaaattgccagattggatgccgaactggagttt
attagtaagaagaagaataatatagaaaaggaagtcagtatatatcagaaaaatggtcca
ttagagacaatccaagaattgcaacaaaagcaaacgcggattaatgaaagaggcaaaaaa
ttaagaaaggaaattgatgagttacaagtattgaaagattcaaactccaaagaatttgat
aaagtttgctcattattaagggataacacattcaaacagaatgaagctgaaaaatccttg
gttgataaaaaaaatatggaactggaaagtgttaaaaaaaatgatgctattaaatcttta
acactaaaaataactgaaggagagagttttgtggccaaacaaaccaaacacatacaacat
ttggagatagaattgagcaacaaaaaagtggagtttaaagccatagagaatgaaacaagg
tccatttttgatacttttgttaaaaacaaggatttgtatattaatttgaagaatgatata
cacaaatttgataccgaaggttctgtgaaattaaaacatgttaaggaacaaatagaaggg
ctaaaaaaagagatgtcccacattactgatgaaattgctgaatttaatgataagattaac
gctgccacaagaactttacaagactctataaaccaagagaaaaacttgaaattaaatatt
gatttattgaacctaaaagacaaactgctatctatagaacaggaaatattaaagctagat
gttcaaaatgcagaagctaaaaaaaaggaatatcaacaggagtcgttaagattaaggaat
atgtttgaaaaattaaatgcggaaaatgccggaaagcttggggagattagacaactagaa
aatcaaataaaagcgctaacagatcagttaaagacggactataaagacattgacgctaaa
tatgagcatgagtgggtcaaattacaggctaaaactctagttaccgatgatatagacact
tactccaaggcactagatagtgcaattatgaaataccatagcttgaaaatgaaggatatc
aacaggattatcgatgagttatggaagaaaacatatagtggcactgatgttgataccatc
atgattaaaacagatgaaatttccaacacccgtggaaaatcctataattaccgagtcgtt
atgtataagcaagatgcagaattagatatgaggggtagatgttctgcaggacaaaaggtg
ttagcatctattatcattaggttggctttgtcagaaacatttggaatcaactgtggtgtt
atagcattggacgaacctactaccaatttagatgaagacaatatagcaagtttagctaaa
gcattgcataatattatccaatatagaagaagtcagagaaacttccaactcattgttatt
acacatgatgaaagttttttaaattatatgaatgcctctgaatttacggaccattttttc
agagttaaaagggatgatagacaaaaatcacaaatagaatgggttgacataaatagaatt
actggatag
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integrated database retrieval system
