Saccharomycodes ludwigii: SCDLUD_004034
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Entry
SCDLUD_004034 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_004034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_004034
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SCDLUD_004034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
70109351
NCBI-ProteinID:
XP_045933681
LinkDB
All DBs
Position
V:complement(<567151..>568257)
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AA seq
368 aa
AA seq
DB search
MNTQEKQNTITTNQPISFPPEVLARIAPDISLQRHLQLGLRPCLRKFEEFREYRTTDGEL
SNKNNPCVLGSNISRLGEMFVITTITGGIIEENMPVTEIDTVKDEIPDFEENTKGEVGFA
SVYPIVQVERGRVGAPTDEEMIVSQKLCESILNSQLITNNSLSINSIGIRNAETQEIVYD
SQKEQNERKLLNNRKWSYVLYSKQQVFSRNSPIFELCLNSLVLALKTVKLPRAYIDERAI
DLKIPIRTRGRSANIRESYDLNFDINERVPLTLNIANIGFASNFGVIKVENSNEDPILLA
DLESEAEESSILSRISIISTPTNKGSATTNFKSIYMAASGDNVPMHLLKRALEISCERTN
DLYKKLSK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaggaaaaacagaacactattactaccaaccaaccaatcagctttccacca
gaggttttagcccgtatcgcacctgatatttcattacaaagacatttacaattgggtttg
agaccatgtttgagaaaatttgaggagtttagagaatatcgtacaactgatggagaactg
agcaataaaaataatccctgtgttttaggtagcaacatatctagactaggcgaaatgttt
gtaatcactaccataactggtggcataatcgaggaaaatatgccagttactgaaatagat
acagttaaggatgaaattcccgattttgaagaaaatactaagggggaagttggttttgcc
tcagtgtatccaattgttcaggtcgaaagaggtagagttggtgcaccaacagatgaagaa
atgattgtctcacaaaaactttgtgaatccatattaaattcacaactcataacaaataat
agtttatccattaattctattggtatacgtaacgctgaaacccaagaaattgtatatgat
tcccaaaaagaacaaaatgaaagaaagcttctaaataataggaaatggtcttatgtgttg
tattctaaacaacaagttttcagtagaaattcgccgatttttgaattgtgcttgaattct
ttagtattagccctaaaaactgttaaattaccccgtgcctacattgatgaaagagccatt
gatttgaaaatccctattagaactagaggtagatccgctaacatcagagaaagttacgac
ttaaattttgatataaatgaaagggtaccattaacattaaatatagctaacataggtttt
gctagtaatttcggcgtaataaaagtggaaaatagtaacgaagatcctattttactagct
gatttagaaagtgaggctgaagaatcttctatattatcaagaatttctataatatctaca
ccaactaacaagggaagtgctaccactaattttaaaagtatatatatggctgcaagcggt
gataatgttccaatgcatctattaaaaagagctttagaaatatcatgtgaaagaaccaat
gatttatataaaaaattatccaaataa
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